RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ANKRD20A2Q5SQ80 823 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ANKRD20A1Q5TYW2 823 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 TDRD7Q8NHU6 1098 aaKnown RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 NSMCE4AQ9NXX6 385 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 PIK3C2BO00750 1634 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 TJP3O95049 919 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 DBN1Q16643 649 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 MYL6BP14649 208 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 PTPREP23469 700 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 IRX3P78415 501 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 CEP57Q86XR8 500 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 MAP4K1Q92918 833 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 OPLAHO14841 1288 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 SERPINB10P48595 397 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 NFIAQ12857 509 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 KAZNQ674X7 775 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ACTN1P12814 892 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 PSMA3P25788 255 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 PTK2Q05397 1052 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 BFSP1Q12934 665 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 POTEAQ6S8J7 498 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 NLRX1Q86UT6 975 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ZNF677Q86XU0 584 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CSGALNACT2Q8N6G5 542 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 RBM17Q96I25 401 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 NAT9Q9BTE0 207 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 PRR12Q9ULL5 1215 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 MRPL11Q9Y3B7 192 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 ATP6V1AP38606 617 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ENPEPQ07075 957 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ADRM1Q16186 407 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CCDC126Q96EE4 140 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 NOC4LQ9BVI4 516 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
USH2A-201ENST00000307340 MED21Q13503 144 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 STILQ15468 1287 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 Q6ZUG5 572 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 NDUFAF2Q8N183 169 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.37□□□□□ -1.71
USH2A-201ENST00000307340 DDX41Q9UJV9 622 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 BRPF3Q9ULD4 1205 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ARHGAP26Q9UNA1 814 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 XRN1Q8IZH2 1706 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 EFCAB14O75071 495 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 RNF8O76064 485 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 SLC39A14Q15043 492 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CFAP61Q8NHU2 1237 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 GSDMBQ8TAX9 411 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TSR2Q969E8 191 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 ENOX1Q8TC92 643 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 CACTINQ8WUQ7 758 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 ATRIPQ8WXE1 791 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 STAMBPL1Q96FJ0 436 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 BLOC1S6Q9UL45 172 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ZNF215Q9UL58 517 aaPredicted RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 RXRGP48443 463 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 RAB15P59190 212 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CDK17Q00537 523 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TFAP4Q01664 338 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 FMO2Q99518 471 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 E7EVH7 732 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 M0QZ92 97 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 H2AFZP0C0S5 128 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ZNF658Q5TYW1 1059 aaPredicted RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 H2AFVQ71UI9 128 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 NEDD4P46934 1319 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 IGSF1Q8N6C5 1336 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CEP104O60308 925 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 HEATR3Q7Z4Q2 680 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 SGMS1Q86VZ5 419 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 INO80BQ9C086 356 aaPredicted RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 UBN1Q9NPG3 1134 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 PCDHA12Q9UN75 941 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TMEM131LA2VDJ0 1609 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TKTP29401 623 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 TRIM28Q13263 835 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 TFDP1Q14186 410 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.37□□□□□ -1.71
USH2A-201ENST00000307340 MTBPQ96DY7 904 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 DDX25Q9UHL0 483 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 PTPRMP28827 1452 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TNNI3KQ59H18 835 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 SLC26A6Q9BXS9 759 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 FPGT-TNNI3KV9GXZ4 949 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CEP170BQ9Y4F5 1589 aaPredicted RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 KANSL1LA0AUZ9 987 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 EIF2B5Q13144 721 aaKnown RBP4.37□□□□□ -1.71
USH2A-201ENST00000307340 ARMCX2Q7L311 632 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 MICU3Q86XE3 530 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ACRBPQ8NEB7 543 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 CMTM5Q96DZ9 223 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 BRIP1Q9BX63 1249 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 KCND1Q9NSA2 647 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 LMTK3Q96Q04 1460 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 KRT37O76014 449 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 ALX1Q15699 326 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 TCERG1LQ5VWI1 586 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 FRA10AC1Q70Z53 315 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 LRRC8CQ8TDW0 803 aa4.37□□□□□ -1.71
USH2A-201ENST00000307340 SRPK1Q96SB4 655 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms