RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CRYGNQ8WXF5 182 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 NAPGQ99747 312 aaPredicted RBP8.07□□□□□ -1.12
RGPD3-201ENST00000304514 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 TUBGCP2Q9BSJ2 902 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 HOXA7P31268 230 aaPredicted RBP8.07□□□□□ -1.12
RGPD3-201ENST00000304514 CHMP4BP1P59074 171 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 FKBP1AP62942 108 aaKnown RBP8.07□□□□□ -1.12
RGPD3-201ENST00000304514 FAM193AP78312 1265 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 GTF2IP78347 998 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 WHAMMP3Q1A5X7 153 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 KCNK18Q7Z418 384 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 TRIM47Q96LD4 638 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 MBOAT7Q96N66 472 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 FUT8Q9BYC5 575 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 AGPAT5Q9NUQ2 364 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 CYP3A7-CYP3A51PA0A087WV96 503 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 PVALEFA0A1B0GWK0 134 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 CYP3A7P24462 503 aa8.07□□□□□ -1.12
RGPD3-201ENST00000304514 NHEJ1Q9H9Q4 299 aaPredicted RBP8.07□□□□□ -1.12
RGPD3-201ENST00000304514 SLC26A4O43511 780 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 TFRCP02786 760 aaKnown RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 HNRNPH3P31942 346 aaKnown RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 STIM1Q13586 685 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 UBE2SQ16763 222 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 LRRC55Q6ZSA7 311 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 FAM114A1Q8IWE2 563 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 CSGALNACT2Q8N6G5 542 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 ANKRD20A12PQ8NF67 263 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 SLF1Q9BQI6 1058 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 NUP58Q9BVL2 599 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 COL4A5P29400 1685 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 MCM6Q14566 821 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 ZCWPW2Q504Y3 356 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 PAPD7Q5XG87 772 aaKnown RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 ZFPM1Q8IX07 1006 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 LARP4BQ92615 738 aaKnown RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 KCNMB3Q9NPA1 279 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 ARGLU1Q9NWB6 273 aaPredicted RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 POTEMA6NI47 508 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 KRT9P35527 623 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 VWA3BQ502W6 1294 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 SV2BQ7L1I2 683 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 DNAJC19Q96DA6 116 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 EPN1Q9Y6I3 576 aaPredicted RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 EIF3CLB5ME19 914 aaKnown RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 AMPD3Q01432 767 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 SOGA3Q5TF21 947 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 TMCO3Q6UWJ1 677 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 SH3BP5LQ7L8J4 393 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 OR8K1Q8NGG5 319 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 MKL1Q969V6 931 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 EIF3CQ99613 913 aaKnown RBP8.06□□□□□ -1.12
RGPD3-201ENST00000304514 TFR2Q9UP52 801 aa8.06□□□□□ -1.12
RGPD3-201ENST00000304514 ZNF263O14978 683 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ZBTB5O15062 677 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 TXKP42681 527 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ASIC1P78348 528 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 BRD3Q15059 726 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ZNF572Q7Z3I7 529 aaPredicted RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 MSL3Q8N5Y2 521 aaKnown RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 CALML4Q96GE6 196 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 VAT1LQ9HCJ6 419 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 DDX25Q9UHL0 483 aaKnown RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 TRPC5Q9UL62 973 aaPredicted RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 NPR1P16066 1061 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 PSMD2Q13200 908 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 IQCDQ96DY2 449 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 GPCPD1Q9NPB8 672 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 MAGEC2Q9UBF1 373 aaPredicted RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ARID2Q68CP9 1835 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 FRMD3A2A2Y4 597 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 EPHB6O15197 1021 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ATP1A1P05023 1023 aaKnown RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 GLIS3Q8NEA6 775 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 CUL5Q93034 780 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 GJA10Q969M2 543 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ZDHHC15Q96MV8 337 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 USP40Q9NVE5 1235 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 LRWD1Q9UFC0 647 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 MYO6Q9UM54 1294 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 PCDHAC2Q9Y5I4 1007 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 BRCA1P38398 1863 aaKnown RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 EIF6P56537 245 aaKnown RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 ZBED6P86452 979 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 BEND6Q5SZJ8 279 aaPredicted RBP8.05□□□□□ -1.12
RGPD3-201ENST00000304514 TEX35Q5T0J7 233 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 TATDN1Q6P1N9 297 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 CCDC170Q8IYT3 715 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 GMCL1P1Q8NEA9 526 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 DCAF4Q8WV16 495 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 SLC39A2Q9NP94 309 aa8.05□□□□□ -1.12
RGPD3-201ENST00000304514 FAM198AQ9UFP1 575 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms