RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 FAAP100Q0VG06 881 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 TMTC3Q6ZXV5 915 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
CLCC1-201ENST00000302500 EEPD1Q7L9B9 569 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 VWCEQ96DN2 955 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 TOX2Q96NM4 488 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 MAP3K20Q9NYL2 800 aaKnown RBP13.09□□□□□ -0.31
CLCC1-201ENST00000302500 TBX21Q9UL17 535 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 MRPL11Q9Y3B7 192 aaKnown RBP13.09□□□□□ -0.31
CLCC1-201ENST00000302500 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.31
CLCC1-201ENST00000302500 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 A6NJR5 290 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
CLCC1-201ENST00000302500 MEIS2O14770 477 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 KIAA0355O15063 1070 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 CD4P01730 458 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
CLCC1-201ENST00000302500 CPA1P15085 419 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 BEX3Q00994 111 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 TLE2Q04725 743 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
CLCC1-201ENST00000302500 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 CMTR1Q8N1G2 835 aaKnown RBP13.08□□□□□ -0.32
CLCC1-201ENST00000302500 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.32
CLCC1-201ENST00000302500 ERICH2A1L162 156 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 PIK3CDO00329 1044 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 C6orf222P0C671 652 aaPredicted RBP13.07□□□□□ -0.32
CLCC1-201ENST00000302500 CDC27P30260 824 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 RCAN1P53805 252 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 VSIG10LQ86VR7 867 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 FAM126BQ8IXS8 530 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 COPS5Q92905 334 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 CTAGE1Q96RT6 745 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
CLCC1-201ENST00000302500 MRPS9P82933 396 aaKnown RBP13.06□□□□□ -0.32
CLCC1-201ENST00000302500 PURAQ00577 322 aaKnown RBP13.06□□□□□ -0.32
CLCC1-201ENST00000302500 SEMA3FQ13275 785 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 PGM5Q15124 567 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 FSCN1Q16658 493 aaKnown RBP13.06□□□□□ -0.32
CLCC1-201ENST00000302500 RNF20Q5VTR2 975 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 CXCL17Q6UXB2 119 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
CLCC1-201ENST00000302500 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
CLCC1-201ENST00000302500 SPTBN5Q9NRC6 3674 aaKnown RBP13.06□□□□□ -0.32
CLCC1-201ENST00000302500 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
CLCC1-201ENST00000302500 PRUNE2Q8WUY3 3088 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 CFBP00751 764 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 NR3C2P08235 984 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 HOXA13P31271 388 aaPredicted RBP13.05□□□□□ -0.32
CLCC1-201ENST00000302500 EPHB4P54760 987 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 SP2Q02086 613 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 NTRK3Q16288 839 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 GNASQ5JWF2 1037 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 RAB11FIP4Q86YS3 637 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 PCSK9Q8NBP7 692 aaKnown RBP13.05□□□□□ -0.32
CLCC1-201ENST00000302500 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 DDX41Q9UJV9 622 aaKnown RBP13.05□□□□□ -0.32
CLCC1-201ENST00000302500 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
CLCC1-201ENST00000302500 TRIP12Q14669 1992 aaPredicted RBP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 ARVCFO00192 962 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 DYNC1LI2O43237 492 aaPredicted RBP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 CALM1P0DP23 149 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 CALM2P0DP24 149 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 CALM3P0DP25 149 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 KIF5BP33176 963 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 KRT32Q14532 448 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 KAT2BQ92831 832 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 GPKOWQ92917 476 aaPredicted RBP eCLIP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 INPP4AQ96PE3 977 aaPredicted RBP13.04□□□□□ -0.32
CLCC1-201ENST00000302500 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 SCN5AQ14524 2016 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms