RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ANO3Q9BYT9 981 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 GLT8D2Q9H1C3 349 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
RFX3-201ENST00000302303 GABRQQ9UN88 632 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 PFASO15067 1338 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 ZNF236Q9UL36 1845 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 SLC15A5A6NIM6 579 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 HOXC6P09630 235 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 PDIA4P13667 645 aaKnown RBP10.85□□□□□ -0.67
RFX3-201ENST00000302303 SREBF1P36956 1147 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 MRPS9P82933 396 aaKnown RBP10.85□□□□□ -0.67
RFX3-201ENST00000302303 AP3B2Q13367 1082 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 PIK3AP1Q6ZUJ8 805 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 CD99L2Q8TCZ2 262 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 MORC4Q8TE76 937 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 TBCKQ8TEA7 893 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 PDCD2LQ9BRP1 358 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 FLRT1Q9NZU1 646 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 RBBP6Q7Z6E9 1792 aaKnown RBP10.85□□□□□ -0.67
RFX3-201ENST00000302303 MGAMO43451 1857 aa10.85□□□□□ -0.67
RFX3-201ENST00000302303 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 RGS20O76081 388 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 FOSP01100 380 aaPredicted RBP10.84□□□□□ -0.67
RFX3-201ENST00000302303 CYP3A4P08684 503 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 UBXN2AP68543 259 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 NBR1Q14596 966 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 KCTD2Q14681 263 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 PGM5Q15124 567 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 INF2Q27J81 1249 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 WDR78Q5VTH9 848 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 MCTP1Q6DN14 999 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 DNERQ8NFT8 737 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 CYP2W1Q8TAV3 490 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 LENG9Q96B70 501 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
RFX3-201ENST00000302303 MBOAT7Q96N66 472 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 RMDN3Q96TC7 470 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 CHMP5Q9NZZ3 219 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 IGLV3-22A0A075B6J6 115 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 CYP3A7-CYP3A51PA0A087WV96 503 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 FAM86B1E9PN63 330 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 FOXN1O15353 648 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 FKTNO75072 461 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 FAM86B2P0C5J1 330 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 CYP3A7P24462 503 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 CIITAP33076 1130 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 ALDH5A1P51649 535 aaPredicted RBP10.84□□□□□ -0.67
RFX3-201ENST00000302303 NUCB2P80303 420 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 ARHGAP4P98171 946 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 MAP2K5Q13163 448 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 NONOQ15233 471 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFX3-201ENST00000302303 SAFBQ15424 915 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFX3-201ENST00000302303 CCL14Q16627 93 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 MCTP2Q6DN12 878 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 VSIG10LQ86VR7 867 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 C4orf32Q8N8J7 132 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 MAML3Q96JK9 1138 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 FTOQ9C0B1 505 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFX3-201ENST00000302303 KATNBL1Q9H079 304 aa10.84□□□□□ -0.67
RFX3-201ENST00000302303 ZSCAN16Q9H4T2 348 aaPredicted RBP10.84□□□□□ -0.67
RFX3-201ENST00000302303 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
RFX3-201ENST00000302303 DIS3Q9Y2L1 958 aaKnown RBP10.84□□□□□ -0.67
RFX3-201ENST00000302303 MYH7BA7E2Y1 1941 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 TNPO2O14787 897 aaKnown RBP10.83□□□□□ -0.68
RFX3-201ENST00000302303 SNAI1O95863 264 aaPredicted RBP10.83□□□□□ -0.68
RFX3-201ENST00000302303 NR3C2P08235 984 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 HSPA8P11142 646 aaKnown RBP10.83□□□□□ -0.68
RFX3-201ENST00000302303 ITGB5P18084 799 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
RFX3-201ENST00000302303 FLT3LGP49771 235 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 USP11P51784 963 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 FCGRTP55899 365 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 PRKCZQ05513 592 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 BRAPQ7Z569 592 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
RFX3-201ENST00000302303 NSUN6Q8TEA1 469 aaKnown RBP10.83□□□□□ -0.68
RFX3-201ENST00000302303 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 PCDHB6Q9Y5E3 794 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 UBIAD1Q9Y5Z9 338 aa10.83□□□□□ -0.68
RFX3-201ENST00000302303 LRRC37A2A6NM11 1700 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 CCDC194A0A1B0GVG4 234 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 TDP2O95551 362 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 SEMA3FQ13275 785 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 PTPAQ15257 358 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 NEK8Q86SG6 692 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 TNPO1Q92973 898 aaKnown RBP10.82□□□□□ -0.68
RFX3-201ENST00000302303 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 IWS1Q96ST2 819 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.82□□□□□ -0.68
RFX3-201ENST00000302303 SRRDQ9UH36 339 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 MRVI1Q9Y6F6 885 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms