RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 COL1A1P02452 1464 aaPredicted RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 SLC1A4P43007 532 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 PABPC4Q13310 644 aaKnown RBP eCLIP13.56□□□□□ -0.247e-8■■□□□ 12
PCSK9-201ENST00000302118 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 ARL6IP4Q66PJ3 421 aaKnown RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 DDX12PQ92771 950 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 LIMA1Q9UHB6 759 aaKnown RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 SCAF8Q9UPN6 1271 aaKnown RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 THRAP3Q9Y2W1 955 aaKnown RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 CCDC151A5D8V7 595 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 FTCDO95954 541 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 CCNE1P24864 410 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 PAFAH1B1P43034 410 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 SHROOM1Q2M3G4 852 aaPredicted RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 SLC35G1Q2M3R5 365 aa13.56□□□□□ -0.24
PCSK9-201ENST00000302118 APTXQ7Z2E3 356 aaKnown RBP13.56□□□□□ -0.24
PCSK9-201ENST00000302118 ESYT3A0FGR9 886 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 SEMA3EO15041 775 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
PCSK9-201ENST00000302118 LLGL1Q15334 1064 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 NFRKBQ6P4R8 1299 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 TNFRSF25Q93038 417 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 FUT8Q9BYC5 575 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 GBP3Q9H0R5 595 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 GOLPH3Q9H4A6 298 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
PCSK9-201ENST00000302118 ATRNO75882 1429 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 MYMKA6NI61 221 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 TRIM37O94972 964 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
PCSK9-201ENST00000302118 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 KLHL7Q8IXQ5 586 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 HAUS4Q9H6D7 363 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 BCCIPQ9P287 314 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCSK9-201ENST00000302118 DDX25Q9UHL0 483 aaKnown RBP13.55□□□□□ -0.24
PCSK9-201ENST00000302118 ZBTB21Q9ULJ3 1066 aa13.55□□□□□ -0.24
PCSK9-201ENST00000302118 MYO5AQ9Y4I1 1855 aaKnown RBP13.55□□□□□ -0.24
PCSK9-201ENST00000302118 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
PCSK9-201ENST00000302118 GUCY2FP51841 1108 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 TRIM14Q14142 442 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 KCTD16Q68DU8 428 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 ANKZF1Q9H8Y5 726 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 MYH2Q9UKX2 1941 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 FLT1P17948 1338 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 LRRC53A6NM62 1247 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 PCP11498 1178 aaKnown RBP13.54□□□□□ -0.24
PCSK9-201ENST00000302118 RCAN1P53805 252 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 BRD3Q15059 726 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
PCSK9-201ENST00000302118 ADAT2Q7Z6V5 191 aaKnown RBP13.54□□□□□ -0.24
PCSK9-201ENST00000302118 GPBP1Q86WP2 473 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 SPATA20Q8TB22 786 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 LSM14BQ9BX40 385 aaKnown RBP13.54□□□□□ -0.24
PCSK9-201ENST00000302118 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
PCSK9-201ENST00000302118 ZEB2O60315 1214 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 USP8P40818 1118 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 FAM204AQ9H8W3 233 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 PCDHA1Q9Y5I3 950 aa13.54□□□□□ -0.24
PCSK9-201ENST00000302118 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 POTECB2RU33 542 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 EPHB6O15197 1021 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
PCSK9-201ENST00000302118 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 LRRC15Q8TF66 581 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
PCSK9-201ENST00000302118 CLIC2O15247 247 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 WHAMMP3Q1A5X7 153 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 KCNK18Q7Z418 384 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 PANK4Q9NVE7 773 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 GLI3P10071 1580 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 ZRANB2O95218 330 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■■■□□ 18.4
PCSK9-201ENST00000302118 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
PCSK9-201ENST00000302118 ADAMTS1Q9UHI8 967 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 LEMD3Q9Y2U8 911 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCSK9-201ENST00000302118 TJP1Q07157 1748 aa13.53□□□□□ -0.24
PCSK9-201ENST00000302118 POTEB2H3BUK9 544 aa13.52□□□□□ -0.24
PCSK9-201ENST00000302118 ARHGAP25P42331 645 aa13.52□□□□□ -0.24
PCSK9-201ENST00000302118 GTF2A1P52655 376 aaPredicted RBP13.52□□□□□ -0.24
PCSK9-201ENST00000302118 KIF11P52732 1056 aa13.52□□□□□ -0.24
PCSK9-201ENST00000302118 HERVK_113P62684 666 aa13.52□□□□□ -0.24
PCSK9-201ENST00000302118 EHHADHQ08426 723 aa13.52□□□□□ -0.24
PCSK9-201ENST00000302118 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.24
PCSK9-201ENST00000302118 SLF2Q8IX21 1173 aa13.52□□□□□ -0.24
PCSK9-201ENST00000302118 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms