RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 IFNKQ9P0W0 207 aa25.1■■□□□ 1.61
SMAD1-201ENST00000302085 FANCCQ00597 558 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 TEX2Q8IWB9 1127 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 TRMT44Q8IYL2 757 aaKnown RBP25.09■■□□□ 1.61
SMAD1-201ENST00000302085 WRNIP1Q96S55 665 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 MAGEF1Q9HAY2 307 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 RNF181Q9P0P0 153 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 MRPL11Q9Y3B7 192 aaKnown RBP25.09■■□□□ 1.61
SMAD1-201ENST00000302085 MARCH6O60337 910 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 TPM3P06753 285 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 PTGS1P23219 599 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 MTMR2Q13614 643 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 CCDC186Q7Z3E2 898 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 PRPF38AQ8NAV1 312 aaKnown RBP25.09■■□□□ 1.61
SMAD1-201ENST00000302085 UIMC1Q96RL1 719 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 SLF1Q9BQI6 1058 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 WDR18Q9BV38 432 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 XPO4Q9C0E2 1151 aaKnown RBP25.09■■□□□ 1.61
SMAD1-201ENST00000302085 PCDHA12Q9UN75 941 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 PPP2R3BQ9Y5P8 575 aa25.09■■□□□ 1.61
SMAD1-201ENST00000302085 CFBP00751 764 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 MYL1P05976 194 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 CLCN1P35523 988 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 SPP2Q13103 211 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 Q4G0T1 1027 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 FCHSD1Q86WN1 690 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 ZNF536O15090 1300 aa25.08■■□□□ 1.61
SMAD1-201ENST00000302085 GCOM1H8Y6P7 765 aaPredicted RBP25.07■■□□□ 1.6
SMAD1-201ENST00000302085 KLRC4O43908 158 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 POLR2MP0CAP2 368 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 PTPRAP18433 802 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 CIITAP33076 1130 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 CCDC144BQ3MJ40 725 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 AGBL1Q96MI9 1066 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 KCNF1Q9H3M0 494 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 RMND1Q9NWS8 449 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 NFE2L3Q9Y4A8 694 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 ABCB11O95342 1321 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 CYP3A4P08684 503 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 PRR16Q569H4 304 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 LENG9Q96B70 501 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 BLOC1S4Q9NUP1 217 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 DOCK1Q14185 1865 aa25.07■■□□□ 1.6
SMAD1-201ENST00000302085 FAM86B1E9PN63 330 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 ICAM1P05362 532 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 FAM86B2P0C5J1 330 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 VCAM1P19320 739 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 ZNF658Q5TYW1 1059 aaPredicted RBP25.06■■□□□ 1.6
SMAD1-201ENST00000302085 KRT79Q5XKE5 535 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 ETNPPLQ8TBG4 499 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 C7orf25Q9BPX7 421 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 PICK1Q9NRD5 415 aa25.06■■□□□ 1.6
SMAD1-201ENST00000302085 ZNF18P17022 549 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 KLHL10Q6JEL2 608 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 SNX29Q8TEQ0 813 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 KLRG1Q96E93 195 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 SSC5DA1L4H1 1573 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 USP14P54578 494 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 BACE1P56817 501 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 KCNB1Q14721 858 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 ECM1Q16610 540 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 KMT5BQ4FZB7 885 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 TMEM119Q4V9L6 283 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 TANGO6Q9C0B7 1094 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 CCPG1Q9ULG6 757 aa25.05■■□□□ 1.6
SMAD1-201ENST00000302085 POLR2AP24928 1970 aaKnown RBP25.04■■□□□ 1.6
SMAD1-201ENST00000302085 STX17P56962 302 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 SLFN12Q8IYM2 578 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 ZNF280CQ8ND82 737 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 TRIM9Q9C026 710 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 AS3MTQ9HBK9 375 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 STK17AQ9UEE5 414 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 TBX3O15119 743 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 ZNF500O60304 480 aaPredicted RBP25.04■■□□□ 1.6
SMAD1-201ENST00000302085 SUPT20HL1Q3ZLR7 823 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 SPATA1Q5VX52 437 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 C9orf131Q5VYM1 1079 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 CYP2W1Q8TAV3 490 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 CDK5RAP3Q96JB5 506 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 RPAP3Q9H6T3 665 aaPredicted RBP25.04■■□□□ 1.6
SMAD1-201ENST00000302085 ADARB2Q9NS39 739 aaKnown RBP25.04■■□□□ 1.6
SMAD1-201ENST00000302085 SAMSN1Q9NSI8 373 aaKnown RBP25.04■■□□□ 1.6
SMAD1-201ENST00000302085 GDAQ9Y2T3 454 aa25.04■■□□□ 1.6
SMAD1-201ENST00000302085 FLOT1O75955 427 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 MCM6Q14566 821 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 DLK2Q6UY11 383 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 SLC38A10Q9HBR0 1119 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 PPP1R9AQ9ULJ8 1098 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 ZHX2Q9Y6X8 837 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 PITPNM2Q9BZ72 1349 aa25.03■■□□□ 1.6
SMAD1-201ENST00000302085 RHOBTB3O94955 611 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 SERPINC1P01008 464 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 UBASH3AP57075 661 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 DHX8Q14562 1220 aaKnown RBP25.02■■□□□ 1.6
SMAD1-201ENST00000302085 HSP90AA4PQ58FG1 418 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 SV2BQ7L1I2 683 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 KCNK18Q7Z418 384 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 RAD54LQ92698 747 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 AMPD3Q01432 767 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 CLEC4DQ8WXI8 215 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms