RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 SREBF1P36956 1147 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 CCZ1BP86790 482 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 CCZ1P86791 482 aaPredicted RBP15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 ARMCX5Q6P1M9 558 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 KCNK18Q7Z418 384 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 CHURC1Q8WUH1 139 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 FAM86B1E9PN63 330 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 COBLO75128 1261 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 FAM86B2P0C5J1 330 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 DGKZQ13574 1117 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 TMC6Q7Z403 805 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 RASSF8Q8NHQ8 419 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 ETNPPLQ8TBG4 499 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 KIFC2Q96AC6 838 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 ZNF341Q9BYN7 854 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 PCDHA12Q9UN75 941 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 DICER1Q9UPY3 1922 aaKnown RBP15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 CTNND1O60716 968 aaKnown RBP15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 CIITAP33076 1130 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 SPIRE1Q08AE8 756 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 NR1I3Q14994 352 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 TMEM119Q4V9L6 283 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 MCTP2Q6DN12 878 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 ADSSL1Q8N142 457 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 GIMAP8Q8ND71 665 aaPredicted RBP15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 UIMC1Q96RL1 719 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 RMND1Q9NWS8 449 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 RWDD2AQ9UIY3 292 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 SYNRGQ9UMZ2 1314 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 SBF1O95248 1867 aa15.28■□□□□ 0.04
CHMP4C-201ENST00000297265 HIRAP54198 1017 aaPredicted RBP15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 SEMA3FQ13275 785 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 TMEM266Q2M3C6 531 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 Q4G0T1 1027 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 HYIQ5T013 277 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 FAM160B2Q86V87 743 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 CYP2W1Q8TAV3 490 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 CALML4Q96GE6 196 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 NAP1L4Q99733 375 aaKnown RBP15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 KIAA1683Q9H0B3 1180 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 FEM1BQ9UK73 627 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 CTNND2Q9UQB3 1225 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 MAPK8IP1Q9UQF2 711 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 ZNF536O15090 1300 aa15.27■□□□□ 0.04
CHMP4C-201ENST00000297265 MYMKA6NI61 221 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 CYP3A4P08684 503 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 PMS1P54277 932 aaKnown RBP15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 MCM6Q14566 821 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 CCDC174Q6PII3 467 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 GPRC5DQ9NZD1 345 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 STK17AQ9UEE5 414 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 ZNF112Q9UJU3 913 aa15.27■□□□□ 0.03
CHMP4C-201ENST00000297265 A0A1B0GTH6 734 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 LRRC10BA6NIK2 292 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 SPDYE3A6NKU9 549 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 CBFA2T2O43439 604 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 STK4Q13043 487 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 TBX2Q13207 712 aaPredicted RBP15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 ANGEL2Q5VTE6 544 aaKnown RBP15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 LARP4BQ92615 738 aaKnown RBP15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 RAB34Q9BZG1 259 aa15.26■□□□□ 0.03
CHMP4C-201ENST00000297265 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 CDK11BP21127 795 aaKnown RBP15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 GSDMDP57764 484 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 PAK1Q13153 545 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 PRR16Q569H4 304 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 LDHDQ86WU2 507 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 IRF2BP1Q8IU81 584 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 TEX2Q8IWB9 1127 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 NELFBQ8WX92 580 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 RAD54LQ92698 747 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 EMILIN3Q9NT22 766 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 ADD3Q9UEY8 706 aaKnown RBP15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 FZD1Q9UP38 647 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 TBX3O15119 743 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 TEX33O43247 280 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 CFBP00751 764 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 SKILP12757 684 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 EPS15P42566 896 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 CNNM4Q6P4Q7 775 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 SV2BQ7L1I2 683 aa15.25■□□□□ 0.03
CHMP4C-201ENST00000297265 POLR2AP24928 1970 aaKnown RBP15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 TRIM49BA6NDI0 452 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 H7C1D1 291 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 MSH4O15457 936 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 FCER1AP12319 257 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 PBX1P40424 430 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 STAT3P40763 770 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms