RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 DEFB128Q7Z7B8 93 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 DNERQ8NFT8 737 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 CHMP4CQ96CF2 233 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
RFC4-201ENST00000296273 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 MTCH2Q9Y6C9 303 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 DDX49Q9Y6V7 483 aaKnown RBP12.41□□□□□ -0.42
RFC4-201ENST00000296273 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 NFIBO00712 420 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 ORC4O43929 436 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 NMT2O60551 498 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 FGRP09769 529 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 BFSP2Q13515 415 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 FAM47CQ5HY64 1035 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 CASC1Q6TDU7 716 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 MTMR7Q9Y216 660 aa12.4□□□□□ -0.42
RFC4-201ENST00000296273 A6NJR5 290 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 TOP1P11387 765 aaKnown RBP12.39□□□□□ -0.43
RFC4-201ENST00000296273 EDNRBP24530 442 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 TFF2Q03403 129 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 PDE4DQ08499 809 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 RASGRP2Q7LDG7 609 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 FAM122AQ96E09 287 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 MAF1Q9H063 256 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 TCP11L1Q9NUJ3 509 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
RFC4-201ENST00000296273 LCTP09848 1927 aa12.39□□□□□ -0.43
RFC4-201ENST00000296273 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 FOXP2O15409 715 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
RFC4-201ENST00000296273 MX1P20591 662 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 CALML3P27482 149 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 SLC16A2P36021 539 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 RPS6P62753 249 aaKnown RBP12.38□□□□□ -0.43
RFC4-201ENST00000296273 ALX1Q15699 326 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 TTBK2Q6IQ55 1244 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 CAGE1Q8TC20 777 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.43
RFC4-201ENST00000296273 TOMM22Q9NS69 142 aa12.38□□□□□ -0.43
RFC4-201ENST00000296273 CHD7Q9P2D1 2997 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 CDC45O75419 566 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 TXNP10599 105 aaKnown RBP12.37□□□□□ -0.43
RFC4-201ENST00000296273 PDHBP11177 359 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 KCNJ6P48051 423 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 KCNQ1P51787 676 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 TAP1Q03518 808 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 TICAM2Q86XR7 235 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 CLEC4DQ8WXI8 215 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 ARNTL2Q8WYA1 636 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 HLA-CQ95604 372 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 TTC14Q96N46 770 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 NECAB3Q96P71 396 aaPredicted RBP12.37□□□□□ -0.43
RFC4-201ENST00000296273 TMEM47Q9BQJ4 181 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 C22orf23Q9BZE7 217 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 CERS4Q9HA82 394 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 LMCD1Q9NZU5 365 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 RAPGEFL1Q9UHV5 662 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 XIRP2A4UGR9 3374 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 TANC1Q9C0D5 1861 aa12.37□□□□□ -0.43
RFC4-201ENST00000296273 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 RFXAPO00287 272 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 TLL1O43897 1013 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
RFC4-201ENST00000296273 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
RFC4-201ENST00000296273 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 SESTD1Q86VW0 696 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 ZMYM6O95789 1325 aa12.36□□□□□ -0.43
RFC4-201ENST00000296273 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
RFC4-201ENST00000296273 SNHG28P0DPA3 235 aa12.35□□□□□ -0.43
RFC4-201ENST00000296273 ZNF543Q08ER8 600 aa12.35□□□□□ -0.43
RFC4-201ENST00000296273 PTGISQ16647 500 aa12.35□□□□□ -0.43
RFC4-201ENST00000296273 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
RFC4-201ENST00000296273 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
RFC4-201ENST00000296273 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
RFC4-201ENST00000296273 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
RFC4-201ENST00000296273 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 EFCAB14O75071 495 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 SEC24BO95487 1268 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 FGAP02671 866 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
RFC4-201ENST00000296273 NT5C2P49902 561 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms