RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 GABRQQ9UN88 632 aa31.73■■■□□ 2.67
CHCHD4-201ENST00000295767 SOWAHBA6NEL2 793 aa31.72■■■□□ 2.67
CHCHD4-201ENST00000295767 FOSP01100 380 aaPredicted RBP31.72■■■□□ 2.67
CHCHD4-201ENST00000295767 DPP9Q86TI2 863 aa31.72■■■□□ 2.67
CHCHD4-201ENST00000295767 RMDN3Q96TC7 470 aa31.72■■■□□ 2.67
CHCHD4-201ENST00000295767 GNL2Q13823 731 aaKnown RBP31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 MCTP2Q6DN12 878 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 MYH15Q9Y2K3 1946 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 U2AF2P26368 475 aaKnown RBP eCLIP31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 PRKCZQ05513 592 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 EARS2Q5JPH6 523 aaKnown RBP31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 KRT25Q7Z3Z0 450 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 DNERQ8NFT8 737 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 NPLOC4Q8TAT6 608 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 PXMP2Q9NR77 195 aa31.71■■■□□ 2.67
CHCHD4-201ENST00000295767 RPTORQ8N122 1335 aa31.7■■■□□ 2.67
CHCHD4-201ENST00000295767 FAM205CA6NFA0 338 aa31.7■■■□□ 2.66
CHCHD4-201ENST00000295767 PDIA4P13667 645 aaKnown RBP31.7■■■□□ 2.66
CHCHD4-201ENST00000295767 RGS2P41220 211 aa31.7■■■□□ 2.66
CHCHD4-201ENST00000295767 PIK3AP1Q6ZUJ8 805 aa31.7■■■□□ 2.66
CHCHD4-201ENST00000295767 FERMT3Q86UX7 667 aa31.7■■■□□ 2.66
CHCHD4-201ENST00000295767 FRMPD4Q14CM0 1322 aa31.7■■■□□ 2.66
CHCHD4-201ENST00000295767 CCDC194A0A1B0GVG4 234 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 GNRH1P01148 92 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 HOXC6P09630 235 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 CYP2B6P20813 491 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 FLT3LGP49771 235 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 ALDH5A1P51649 535 aaPredicted RBP31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 UBXN2AP68543 259 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 NOSTRINQ8IVI9 506 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 NSUN6Q8TEA1 469 aaKnown RBP31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 ADD3Q9UEY8 706 aaKnown RBP31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 SRRDQ9UH36 339 aa31.69■■■□□ 2.66
CHCHD4-201ENST00000295767 EIF2AK2P19525 551 aaKnown RBP31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 CTCFP49711 727 aaPredicted RBP31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 ARHGEF6Q15052 776 aa31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 ARHGEF16Q5VV41 709 aa31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 APBA2Q99767 749 aa31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 SLC5A4Q9NY91 659 aa31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 DIS3Q9Y2L1 958 aaKnown RBP31.68■■■□□ 2.66
CHCHD4-201ENST00000295767 HOXD10P28358 340 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 LBX1P52954 281 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 NONOQ15233 471 aaKnown RBP eCLIP31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 FOXD4L5Q5VV16 416 aaPredicted RBP31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 FOXD4L4Q8WXT5 416 aaPredicted RBP31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 MAML3Q96JK9 1138 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 PDCD2LQ9BRP1 358 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 DDX49Q9Y6V7 483 aaKnown RBP31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 ZSCAN22P10073 491 aaPredicted RBP31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 SREBF1P36956 1147 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 IL31RAQ8NI17 732 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 EHMT1Q9H9B1 1298 aa31.67■■■□□ 2.66
CHCHD4-201ENST00000295767 RESTQ13127 1097 aa31.66■■■□□ 2.66
CHCHD4-201ENST00000295767 PGM5Q15124 567 aa31.66■■■□□ 2.66
CHCHD4-201ENST00000295767 TBCKQ8TEA7 893 aa31.66■■■□□ 2.66
CHCHD4-201ENST00000295767 ZDHHC9Q9Y397 364 aa31.66■■■□□ 2.66
CHCHD4-201ENST00000295767 BRD1O95696 1058 aa31.65■■■□□ 2.66
CHCHD4-201ENST00000295767 INF2Q27J81 1249 aa31.65■■■□□ 2.66
CHCHD4-201ENST00000295767 OTOP1Q7RTM1 612 aa31.65■■■□□ 2.66
CHCHD4-201ENST00000295767 ZNF467Q7Z7K2 595 aaPredicted RBP31.65■■■□□ 2.66
CHCHD4-201ENST00000295767 TRIM17Q9Y577 477 aa31.65■■■□□ 2.66
CHCHD4-201ENST00000295767 KIAA1217Q5T5P2 1943 aa31.65■■■□□ 2.66
CHCHD4-201ENST00000295767 CCL14Q16627 93 aa31.64■■■□□ 2.66
CHCHD4-201ENST00000295767 CRYGNQ8WXF5 182 aa31.64■■■□□ 2.66
CHCHD4-201ENST00000295767 ARHGAP4P98171 946 aa31.64■■■□□ 2.65
CHCHD4-201ENST00000295767 FLRT1Q9NZU1 646 aa31.64■■■□□ 2.65
CHCHD4-201ENST00000295767 NR3C2P08235 984 aa31.63■■■□□ 2.65
CHCHD4-201ENST00000295767 XRCC5P13010 732 aaKnown RBP31.63■■■□□ 2.65
CHCHD4-201ENST00000295767 EDNRBP24530 442 aa31.63■■■□□ 2.65
CHCHD4-201ENST00000295767 IWS1Q96ST2 819 aa31.63■■■□□ 2.65
CHCHD4-201ENST00000295767 EDIL3O43854 480 aa31.62■■■□□ 2.65
CHCHD4-201ENST00000295767 F13A1P00488 732 aa31.62■■■□□ 2.65
CHCHD4-201ENST00000295767 BRAPQ7Z569 592 aa31.62■■■□□ 2.65
CHCHD4-201ENST00000295767 CIZ1Q9ULV3 898 aaPredicted RBP31.62■■■□□ 2.65
CHCHD4-201ENST00000295767 LOC102724159A0A0B4J2E5 919 aa31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 MYCLP12524 364 aaPredicted RBP31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 IRF5Q13568 498 aa31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 PWP2Q15269 919 aaKnown RBP31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 PCNX4Q63HM2 1172 aa31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 MAMDC4Q6UXC1 1216 aa31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 ZFP91Q96JP5 570 aaPredicted RBP31.61■■■□□ 2.65
CHCHD4-201ENST00000295767 ASB14A6NK59 587 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 PRMT2P55345 433 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 NUCB2P80303 420 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 ARMCX2Q7L311 632 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 NEK8Q86SG6 692 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 MORC4Q8TE76 937 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 MPHOSPH6Q99547 160 aaKnown RBP31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 TINF2Q9BSI4 451 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 ZSCAN16Q9H4T2 348 aaPredicted RBP31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 CCND2P30279 289 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 MRPS9P82933 396 aaKnown RBP31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 PDE4DQ08499 809 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 OLFML2BQ68BL8 750 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 VSIG10LQ86VR7 867 aa31.6■■■□□ 2.65
CHCHD4-201ENST00000295767 B4DLN1 442 aa31.59■■■□□ 2.65
CHCHD4-201ENST00000295767 CYP3A4P08684 503 aa31.59■■■□□ 2.65
CHCHD4-201ENST00000295767 TRIB2Q92519 343 aa31.59■■■□□ 2.65
CHCHD4-201ENST00000295767 WNT7AO00755 349 aa31.58■■■□□ 2.65
CHCHD4-201ENST00000295767 USP11P51784 963 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms