RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 GGA3Q9NZ52 723 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 R3HCC1Q9Y3T6 440 aaKnown RBP10.3□□□□□ -0.76
PDPN-201ENST00000294489 ZNF536O15090 1300 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
PDPN-201ENST00000294489 SLC37A4O43826 429 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 CIITAP33076 1130 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 SREBF1P36956 1147 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 SEMA3FQ13275 785 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 POTEDQ86YR6 584 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 MTRQ99707 1265 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 ANO3Q9BYT9 981 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 BLZF1Q9H2G9 400 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 MAGEF1Q9HAY2 307 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 ABCB11O95342 1321 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 PTPRAP18433 802 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 INPP5BP32019 993 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 TERF1P54274 439 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 CUL4BQ13620 913 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 CALCRLQ16602 461 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 Q4G0T1 1027 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 KLHL10Q6JEL2 608 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 CABP7Q86V35 215 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 TRMT44Q8IYL2 757 aaKnown RBP10.29□□□□□ -0.76
PDPN-201ENST00000294489 HAS1Q92839 578 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 MMTAG2Q9BU76 263 aaKnown RBP10.29□□□□□ -0.76
PDPN-201ENST00000294489 RAB34Q9BZG1 259 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 KCNMB3Q9NPA1 279 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 RNF181Q9P0P0 153 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 PP2D1A8MPX8 630 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 DDNO94850 711 aaPredicted RBP10.29□□□□□ -0.76
PDPN-201ENST00000294489 TDP2O95551 362 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 SKILP12757 684 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP14P54578 494 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 SNAP25P60880 206 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 IKQ13123 557 aaPredicted RBP10.29□□□□□ -0.76
PDPN-201ENST00000294489 SPATA1Q5VX52 437 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 SYNRGQ9UMZ2 1314 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 RPN1P04843 607 aaKnown RBP10.29□□□□□ -0.76
PDPN-201ENST00000294489 ICAM1P05362 532 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 ZNF18P17022 549 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 TECP42680 631 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 SAMD3Q8N6K7 520 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 CALML4Q96GE6 196 aa10.29□□□□□ -0.76
PDPN-201ENST00000294489 TXKP42681 527 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 TPD52L1Q16890 204 aaPredicted RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 SUPT20HL1Q3ZLR7 823 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 ZNF658Q5TYW1 1059 aaPredicted RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 C9orf131Q5VYM1 1079 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 PRPF38AQ8NAV1 312 aaKnown RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.76
PDPN-201ENST00000294489 LRRC15Q8TF66 581 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 AS3MTQ9HBK9 375 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 ADAMTS5Q9UNA0 930 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 PPP1R3GB7ZBB8 358 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 TBX3O15119 743 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 USP2O75604 605 aaPredicted RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 FDX1P10109 184 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 HSD17B4P51659 736 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 BACE1P56817 501 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 HYIQ5T013 277 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 CCDC47Q96A33 483 aaKnown RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 LENG9Q96B70 501 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 SLF1Q9BQI6 1058 aa10.28□□□□□ -0.76
PDPN-201ENST00000294489 DDX25Q9UHL0 483 aaKnown RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
PDPN-201ENST00000294489 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.76
PDPN-201ENST00000294489 VCAM1P19320 739 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 AMPD3Q01432 767 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 HSP90AA4PQ58FG1 418 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 CNNM4Q6P4Q7 775 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 VSTM4Q8IW00 320 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.76
PDPN-201ENST00000294489 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 SLC38A10Q9HBR0 1119 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 LRWD1Q9UFC0 647 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 PNMA2Q9UL42 364 aa10.27□□□□□ -0.76
PDPN-201ENST00000294489 FRMPD4Q14CM0 1322 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 C19orf81C9J6K1 198 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 MARCH6O60337 910 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 PLCG1P19174 1290 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 STX17P56962 302 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms