RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 C7orf25Q9BPX7 421 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 ENC1O14682 589 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 NDUFA10O95299 355 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 GDF11O95390 407 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 KRT79Q5XKE5 535 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 SEMA6BQ9H3T3 888 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 ESYT2A0FGR8 921 aa17.64■□□□□ 0.42
NCKIPSD-201ENST00000294129 CNNM4Q6P4Q7 775 aa17.64■□□□□ 0.42
NCKIPSD-201ENST00000294129 CUL5Q93034 780 aa17.64■□□□□ 0.42
NCKIPSD-201ENST00000294129 TRIM34Q9BYJ4 488 aa17.64■□□□□ 0.42
NCKIPSD-201ENST00000294129 BICDL2A1A5D9 508 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 DDTLA6NHG4 134 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 ECM1Q16610 540 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 ZNF507Q8TCN5 953 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 GOLGA1Q92805 767 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 DNAJC18Q9H819 358 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 IGKV6D-41A0A0C4DH26 115 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 KLRG2A4D1S0 409 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 SLC1A4P43007 532 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 DNM2P50570 870 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 SWAP70Q9UH65 585 aa17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 REXO2Q9Y3B8 237 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-201ENST00000294129 APBA3O96018 575 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 SNHG28P0DPA3 235 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 EEF2P13639 858 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 ARHGAP25P42331 645 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 NOVP48745 357 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 USH1GQ495M9 461 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 DDX12PQ92771 950 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 PARD6BQ9BYG5 372 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 RAB34Q9BZG1 259 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 RIC8AQ9NPQ8 531 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 FAM207AQ9NSI2 230 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 FHOD1Q9Y613 1164 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 BMS1Q14692 1282 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 KIAA1328Q86T90 577 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 MAGEF1Q9HAY2 307 aa17.63■□□□□ 0.41
NCKIPSD-201ENST00000294129 ZBTB5O15062 677 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 RHOXF2BP0C7M4 288 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 CYP27A1Q02318 531 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 WDR59Q6PJI9 974 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 TMC4Q7Z404 712 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 RHOXF2Q9BQY4 288 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 PCDHA1Q9Y5I3 950 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 SEPT2Q15019 361 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 QRICH1Q2TAL8 776 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 NAPGQ99747 312 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 CDC23Q9UJX2 597 aa17.62■□□□□ 0.41
NCKIPSD-201ENST00000294129 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 CCDC122Q5T0U0 273 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 NCAPH2Q6IBW4 605 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 RAD54LQ92698 747 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 HDAC6Q9UBN7 1215 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 CAPN11Q9UMQ6 739 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 PCDHA12Q9UN75 941 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 MYH4Q9Y623 1939 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 PLIN4Q96Q06 1357 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 MYH7BA7E2Y1 1941 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 STAT3P40763 770 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 FXR2P51116 673 aaKnown RBP eCLIP17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 HAS1Q92839 578 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 MMRN2Q9H8L6 949 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 ZNHIT6Q9NWK9 470 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 RASSF10A6NK89 507 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 CHRNA5P30532 468 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 PDE6BP35913 854 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 FKBP15Q5T1M5 1219 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 GPATCH4Q5T3I0 446 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 SLFN13Q68D06 897 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 RSRC2Q7L4I2 434 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 SRGAP1Q7Z6B7 1085 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 GPR161Q8N6U8 529 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 SUGT1Q9Y2Z0 365 aa17.61■□□□□ 0.41
NCKIPSD-201ENST00000294129 A0A1W2PQC6 194 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 E9PMD0 336 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 POLR3GO15318 223 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 PLEKP08567 350 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 FECHP22830 423 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 UNC13DQ70J99 1090 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 NELFCDQ8IXH7 590 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 SPICE1Q8N0Z3 855 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 CCDC155Q8N6L0 562 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 NOC3LQ8WTT2 800 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms