RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 SV2BQ7L1I2 683 aa21.32■■□□□ 1
LSM12-201ENST00000293406 FAM76AQ8TAV0 307 aa21.32■■□□□ 1
LSM12-201ENST00000293406 HINFPQ9BQA5 517 aa21.32■■□□□ 1
LSM12-201ENST00000293406 PLEKHA4Q9H4M7 779 aa21.32■■□□□ 1
LSM12-201ENST00000293406 EPHB6O15197 1021 aa21.31■■□□□ 1
LSM12-201ENST00000293406 AKR1B10O60218 316 aa21.31■■□□□ 1
LSM12-201ENST00000293406 SPATA4Q8NEY3 305 aa21.31■■□□□ 1
LSM12-201ENST00000293406 RUBCNQ92622 972 aa21.31■■□□□ 1
LSM12-201ENST00000293406 ALS2CR12Q96Q35 445 aa21.31■■□□□ 1
LSM12-201ENST00000293406 LRRC1Q9BTT6 524 aa21.31■■□□□ 1
LSM12-201ENST00000293406 MMRN2Q9H8L6 949 aa21.31■■□□□ 1
LSM12-201ENST00000293406 GOLGA6CA6NDK9 693 aa21.3■■□□□ 1
LSM12-201ENST00000293406 LCA5LO95447 670 aa21.3■■□□□ 1
LSM12-201ENST00000293406 GOLGA6DP0CG33 693 aa21.3■■□□□ 1
LSM12-201ENST00000293406 EZH2Q15910 746 aaKnown RBP21.3■■□□□ 1
LSM12-201ENST00000293406 MAN2A1Q16706 1144 aa21.3■■□□□ 1
LSM12-201ENST00000293406 CCDC84Q86UT8 332 aaPredicted RBP21.3■■□□□ 1
LSM12-201ENST00000293406 OSBPL9Q96SU4 736 aa21.3■■□□□ 1
LSM12-201ENST00000293406 GOLGA6AQ9NYA3 693 aa21.3■■□□□ 1
LSM12-201ENST00000293406 TCP1P17987 556 aaKnown RBP21.3■■□□□ 1
LSM12-201ENST00000293406 SOGA3Q5TF21 947 aa21.3■■□□□ 1
LSM12-201ENST00000293406 SND1Q7KZF4 910 aaKnown RBP eCLIP21.3■■□□□ 1
LSM12-201ENST00000293406 TBCKQ8TEA7 893 aa21.3■■□□□ 1
LSM12-201ENST00000293406 TGFBRAP1Q8WUH2 860 aa21.3■■□□□ 1
LSM12-201ENST00000293406 HDAC7Q8WUI4 952 aa21.3■■□□□ 1
LSM12-201ENST00000293406 HYOU1Q9Y4L1 999 aa21.3■■□□□ 1
LSM12-201ENST00000293406 FGFR1OPO95684 399 aaKnown RBP21.29■■□□□ 1
LSM12-201ENST00000293406 BAG3O95817 575 aa21.29■■□□□ 1
LSM12-201ENST00000293406 RASA1P20936 1047 aa21.29■■□□□ 1
LSM12-201ENST00000293406 POTEDQ86YR6 584 aa21.29■■□□□ 1
LSM12-201ENST00000293406 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
LSM12-201ENST00000293406 RRP36Q96EU6 259 aaKnown RBP21.29■■□□□ 1
LSM12-201ENST00000293406 NYXQ9GZU5 481 aa21.29■■□□□ 1
LSM12-201ENST00000293406 DMGDHQ9UI17 866 aaKnown RBP21.29■■□□□ 1
LSM12-201ENST00000293406 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
LSM12-201ENST00000293406 TXKP42681 527 aa21.29■■□□□ 1
LSM12-201ENST00000293406 MAGEA9P43362 315 aa21.29■■□□□ 1
LSM12-201ENST00000293406 CCDC181Q5TID7 509 aa21.29■■□□□ 1
LSM12-201ENST00000293406 NFRKBQ6P4R8 1299 aa21.29■■□□□ 1
LSM12-201ENST00000293406 UNC13DQ70J99 1090 aa21.29■■□□□ 1
LSM12-201ENST00000293406 RRAGAQ7L523 313 aa21.29■■□□□ 1
LSM12-201ENST00000293406 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
LSM12-201ENST00000293406 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
LSM12-201ENST00000293406 LRRC53A6NM62 1247 aa21.28■■□□□ 1
LSM12-201ENST00000293406 SHOX2O60902 331 aaPredicted RBP21.28■■□□□ 1
LSM12-201ENST00000293406 MATR3P43243 847 aaKnown RBP eCLIP21.28■■□□□ 1
LSM12-201ENST00000293406 DIXDC1Q155Q3 683 aa21.28■■□□□ 1
LSM12-201ENST00000293406 WDR66Q8TBY9 1149 aa21.28■■□□□ 1
LSM12-201ENST00000293406 SAP30BPQ9UHR5 308 aaKnown RBP21.28■■□□□ 1
LSM12-201ENST00000293406 THRAP3Q9Y2W1 955 aaKnown RBP21.28■■□□□ 1
LSM12-201ENST00000293406 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
LSM12-201ENST00000293406 MYMKA6NI61 221 aa21.28■■□□□ 1
LSM12-201ENST00000293406 MAGEA1P43355 309 aa21.28■■□□□ 1
LSM12-201ENST00000293406 GRB10Q13322 594 aa21.28■■□□□ 1
LSM12-201ENST00000293406 ORC2Q13416 577 aaPredicted RBP21.28■■□□□ 1
LSM12-201ENST00000293406 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.28■■□□□ 1
LSM12-201ENST00000293406 PSMB7Q99436 277 aa21.28■■□□□ 1
LSM12-201ENST00000293406 ZNF287Q9HBT7 754 aa21.28■■□□□ 1
LSM12-201ENST00000293406 BLOC1S4Q9NUP1 217 aa21.28■■□□□ 1
LSM12-201ENST00000293406 STK17AQ9UEE5 414 aa21.28■■□□□ 1
LSM12-201ENST00000293406 ABCB11O95342 1321 aa21.28■■□□□ 1
LSM12-201ENST00000293406 PVALEFA0A1B0GWK0 134 aa21.27■■□□□ 1
LSM12-201ENST00000293406 KCNQ2O43526 872 aa21.27■■□□□ 1
LSM12-201ENST00000293406 CXCR5P32302 372 aa21.27■■□□□ 1
LSM12-201ENST00000293406 CORO7P57737 925 aa21.27■■□□□ 1
LSM12-201ENST00000293406 GSTO1P78417 241 aa21.27■■□□□ 1
LSM12-201ENST00000293406 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
LSM12-201ENST00000293406 USP17L2Q6R6M4 530 aa21.27■■□□□ 1
LSM12-201ENST00000293406 DYMQ7RTS9 669 aa21.27■■□□□ 1
LSM12-201ENST00000293406 NBPF5PQ86XG9 351 aaPredicted RBP21.27■■□□□ 1
LSM12-201ENST00000293406 REXO1Q8N1G1 1221 aaKnown RBP21.27■■□□□ 1
LSM12-201ENST00000293406 GUF1Q8N442 669 aaKnown RBP21.27■■□□□ 1
LSM12-201ENST00000293406 CDK5RAP3Q96JB5 506 aa21.27■■□□□ 1
LSM12-201ENST00000293406 VAT1LQ9HCJ6 419 aa21.27■■□□□ 1
LSM12-201ENST00000293406 BIN2Q9UBW5 565 aaPredicted RBP21.27■■□□□ 1
LSM12-201ENST00000293406 SLC7A5Q01650 507 aa21.27■□□□□ 0.99
LSM12-201ENST00000293406 DNAJC21Q5F1R6 531 aaKnown RBP21.27■□□□□ 0.99
LSM12-201ENST00000293406 GPIHBP1Q8IV16 184 aa21.27■□□□□ 0.99
LSM12-201ENST00000293406 MAPKAPK5Q8IW41 473 aa21.27■□□□□ 0.99
LSM12-201ENST00000293406 CCDC24Q8N4L8 307 aa21.27■□□□□ 0.99
LSM12-201ENST00000293406 LARP4BQ92615 738 aaKnown RBP21.27■□□□□ 0.99
LSM12-201ENST00000293406 SETDB2Q96T68 719 aa21.27■□□□□ 0.99
LSM12-201ENST00000293406 PAFAH1B1P43034 410 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 LRRC63Q05C16 580 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 CALCRLQ16602 461 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 SMIM5Q71RC9 77 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 EYA3Q99504 573 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 IRS2Q9Y4H2 1338 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 PPP4CP60510 307 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 MRPS25P82663 173 aaKnown RBP21.26■□□□□ 0.99
LSM12-201ENST00000293406 BAP1Q92560 729 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 SMARCAL1Q9NZC9 954 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 STIM2Q9P246 746 aa21.26■□□□□ 0.99
LSM12-201ENST00000293406 COL5A3P25940 1745 aaPredicted RBP21.25■□□□□ 0.99
LSM12-201ENST00000293406 PJA2O43164 708 aa21.25■□□□□ 0.99
LSM12-201ENST00000293406 EPHB4P54760 987 aa21.25■□□□□ 0.99
LSM12-201ENST00000293406 SKIDA1Q1XH10 827 aa21.25■□□□□ 0.99
LSM12-201ENST00000293406 CACNA2D4Q7Z3S7 1137 aa21.25■□□□□ 0.99
LSM12-201ENST00000293406 PNMA5Q96PV4 448 aa21.25■□□□□ 0.99
LSM12-201ENST00000293406 MTMR9Q96QG7 549 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms