RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PLIN2Q99541 437 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 SAMSN1Q9NSI8 373 aaKnown RBP11.45□□□□□ -0.58
C9orf43-201ENST00000288462 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 SCAF8Q9UPN6 1271 aaKnown RBP11.45□□□□□ -0.58
C9orf43-201ENST00000288462 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 CIITAP33076 1130 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 PAK1Q13153 545 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 DHX8Q14562 1220 aaKnown RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 NOLC1Q14978 699 aaKnown RBP eCLIP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 Q4G0T1 1027 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 HYIQ5T013 277 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 KLHL10Q6JEL2 608 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 TMC6Q7Z403 805 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 CCDC150Q8NCX0 1101 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 NAP1L5Q96NT1 182 aaPredicted RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 ZNF341Q9BYN7 854 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 KIAA1683Q9H0B3 1180 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 PAPPA2Q9BXP8 1791 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 SPDYE3A6NKU9 549 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 TBX3O15119 743 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 WDR46O15213 610 aaKnown RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 CYP3A4P08684 503 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 CCZ1BP86790 482 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 KRT79Q5XKE5 535 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 APTXQ7Z2E3 356 aaKnown RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 C17orf53Q8N3J3 647 aaPredicted RBP11.44□□□□□ -0.58
C9orf43-201ENST00000288462 ETNPPLQ8TBG4 499 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 SNX29Q8TEQ0 813 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 LPAR1Q92633 364 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 LENG9Q96B70 501 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 GDAQ9Y2T3 454 aa11.44□□□□□ -0.58
C9orf43-201ENST00000288462 ABCB11O95342 1321 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 AMPD3Q01432 767 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 CNNM4Q6P4Q7 775 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 APOBEC3FQ8IUX4 373 aaKnown RBP11.43□□□□□ -0.58
C9orf43-201ENST00000288462 SLFN12Q8IYM2 578 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 GIMAP8Q8ND71 665 aaPredicted RBP11.43□□□□□ -0.58
C9orf43-201ENST00000288462 RAD54LQ92698 747 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 FEZ1Q99689 392 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 NUDT12Q9BQG2 462 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 GTPBP4Q9BZE4 634 aaKnown RBP11.43□□□□□ -0.58
C9orf43-201ENST00000288462 KDM3AQ9Y4C1 1321 aa11.43□□□□□ -0.58
C9orf43-201ENST00000288462 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 PRCPP42785 496 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 STX17P56962 302 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 ARMCX5Q6P1M9 558 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 CCDC174Q6PII3 467 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 NELFBQ8WX92 580 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 LARP4BQ92615 738 aaKnown RBP11.42□□□□□ -0.58
C9orf43-201ENST00000288462 CDK5RAP3Q96JB5 506 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 FBXO28Q9NVF7 368 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 GPRC5DQ9NZD1 345 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 ZNF112Q9UJU3 913 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 PCDHA12Q9UN75 941 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 WDR90Q96KV7 1748 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 SSC5DA1L4H1 1573 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
C9orf43-201ENST00000288462 HOXA13P31271 388 aaPredicted RBP11.42□□□□□ -0.58
C9orf43-201ENST00000288462 SPIRE1Q08AE8 756 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 COBLL1Q53SF7 1204 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 HSP90AA4PQ58FG1 418 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 NBPF12Q5TAG4 269 aaPredicted RBP11.42□□□□□ -0.58
C9orf43-201ENST00000288462 DCAF15Q66K64 600 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 SV2BQ7L1I2 683 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 CCDC47Q96A33 483 aaKnown RBP11.42□□□□□ -0.58
C9orf43-201ENST00000288462 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
C9orf43-201ENST00000288462 RLFQ13129 1914 aa11.42□□□□□ -0.58
C9orf43-201ENST00000288462 FAM86B1E9PN63 330 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 H7C1D1 291 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 FAM86B2P0C5J1 330 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 LMNB1P20700 586 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 INPP5BP32019 993 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 ASIC1P78348 528 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 TBX2Q13207 712 aaPredicted RBP11.41□□□□□ -0.58
C9orf43-201ENST00000288462 KCNK18Q7Z418 384 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 GPC2Q8N158 579 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 TRPM4Q8TD43 1214 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 GJA10Q969M2 543 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 FAM20AQ96MK3 541 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 SLF1Q9BQI6 1058 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 NT5C3AQ9H0P0 336 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 EXOC1Q9NV70 894 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 ZNF536O15090 1300 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 IGLV3-22A0A075B6J6 115 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 MYMKA6NI61 221 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 GCOM1H8Y6P7 765 aaPredicted RBP11.41□□□□□ -0.58
C9orf43-201ENST00000288462 MARCH6O60337 910 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms