RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HSD17B4P51659 736 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 RCAN1P53805 252 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 RPS6P62753 249 aaKnown RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 SART3Q15020 963 aaKnown RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 PWP2Q15269 919 aaKnown RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 APOA5Q6Q788 366 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 CATIPQ7Z7H3 387 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 CCDC144CPQ8IYA2 1237 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 DDX11Q96FC9 970 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 PIGSQ96S52 555 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 PNMA6FA0A0J9YX94 578 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ERICH2A1L162 156 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ADAMTS4O75173 837 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 PLEKHA8P1O95397 391 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 RPS6KB1P23443 525 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 CDC27P30260 824 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 PDE4DQ08499 809 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ACVR2BQ13705 512 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 NTRK3Q16288 839 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 TMEM63BQ5T3F8 832 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 SLC30A10Q6XR72 485 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ARMCX2Q7L311 632 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 FBXO11Q86XK2 927 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 KLHDC9Q8NEP7 349 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 SYTL5Q8TDW5 730 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-201ENST00000288344 DIS3LQ8TF46 1054 aaKnown RBP10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ABHD16BQ9H3Z7 469 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 GNEQ9Y223 722 aaKnown RBP10.65□□□□□ -0.7
HMGN1-201ENST00000288344 ABCB11O95342 1321 aa10.65□□□□□ -0.7
HMGN1-201ENST00000288344 MSCO60682 206 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
HMGN1-201ENST00000288344 RXRAP19793 462 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 SLC4A3P48751 1232 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 TOB2Q14106 344 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-201ENST00000288344 TMTC3Q6ZXV5 915 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 RUFY3Q7L099 469 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 CMTR1Q8N1G2 835 aaKnown RBP10.64□□□□□ -0.71
HMGN1-201ENST00000288344 SAMD3Q8N6K7 520 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 DNERQ8NFT8 737 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 PAWRQ96IZ0 340 aaKnown RBP10.64□□□□□ -0.71
HMGN1-201ENST00000288344 JAKMIP1Q96N16 626 aaKnown RBP10.64□□□□□ -0.71
HMGN1-201ENST00000288344 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 AMNQ9BXJ7 453 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 MAP3K20Q9NYL2 800 aaKnown RBP10.64□□□□□ -0.71
HMGN1-201ENST00000288344 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
HMGN1-201ENST00000288344 CALM1P0DP23 149 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 CALM2P0DP24 149 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 CALM3P0DP25 149 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 ALDH5A1P51649 535 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-201ENST00000288344 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 NSMFQ6X4W1 530 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 RNF207Q6ZRF8 634 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 Q6ZUG5 572 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 TAAR1Q96RJ0 339 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 KIF2CQ99661 725 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 UPF3AQ9H1J1 476 aaKnown RBP10.63□□□□□ -0.71
HMGN1-201ENST00000288344 CWC22Q9HCG8 908 aaKnown RBP10.63□□□□□ -0.71
HMGN1-201ENST00000288344 PDGFCQ9NRA1 345 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 MRPL11Q9Y3B7 192 aaKnown RBP10.63□□□□□ -0.71
HMGN1-201ENST00000288344 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-201ENST00000288344 PCDHA1Q9Y5I3 950 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 SLC12A7Q9Y666 1083 aa10.63□□□□□ -0.71
HMGN1-201ENST00000288344 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-201ENST00000288344 FAM205CA6NFA0 338 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 ASB14A6NK59 587 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 MEIS2O14770 477 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 DUSP11O75319 330 aaKnown RBP10.62□□□□□ -0.71
HMGN1-201ENST00000288344 RGS20O76081 388 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 FARP2O94887 1054 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-201ENST00000288344 PTGS1P23219 599 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
HMGN1-201ENST00000288344 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
HMGN1-201ENST00000288344 GNAQP50148 359 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 ANAPC15P60006 121 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 SNX17Q15036 470 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 PPP2R5BQ15173 497 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 LRRC41Q15345 812 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 USH1GQ495M9 461 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 CCDC62Q6P9F0 684 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 FRMPD4Q14CM0 1322 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
HMGN1-201ENST00000288344 MYADML2A6NDP7 307 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 PIK3CDO00329 1044 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 DNM1LO00429 736 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 ZBTB43O43298 467 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms