RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 FERMT2Q96AC1 680 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 IWS1Q96ST2 819 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 PXMP2Q9NR77 195 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 FAM217BQ9NTX9 383 aaPredicted RBP29.01■■■□□ 2.23
PDF-201ENST00000288022 PDRG1Q9NUG6 133 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 ATN1P54259 1190 aaPredicted RBP29■■■□□ 2.23
PDF-201ENST00000288022 CUL5Q93034 780 aa29■■■□□ 2.23
PDF-201ENST00000288022 WDR11Q9BZH6 1224 aa29■■■□□ 2.23
PDF-201ENST00000288022 AP5M1Q9H0R1 490 aa29■■■□□ 2.23
PDF-201ENST00000288022 ALPK3Q96L96 1907 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 MYADML2A6NDP7 307 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 SEC24BO95487 1268 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 ADD1P35611 737 aaKnown RBP28.99■■■□□ 2.23
PDF-201ENST00000288022 GJA9P57773 515 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 ANAPC15P60006 121 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 TOB2Q14106 344 aaPredicted RBP28.99■■■□□ 2.23
PDF-201ENST00000288022 STXBP2Q15833 593 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 LRRC26Q2I0M4 334 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 TLK2Q86UE8 772 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 C7orf61Q8IZ16 206 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 GPKOWQ92917 476 aaPredicted RBP eCLIP28.99■■■□□ 2.23
PDF-201ENST00000288022 UPF3AQ9H1J1 476 aaKnown RBP28.99■■■□□ 2.23
PDF-201ENST00000288022 PHF24Q9UPV7 400 aa28.99■■■□□ 2.23
PDF-201ENST00000288022 V9GY48 417 aaPredicted RBP28.99■■■□□ 2.23
PDF-201ENST00000288022 IRX5P78411 483 aaPredicted RBP28.98■■■□□ 2.23
PDF-201ENST00000288022 FUT2Q10981 343 aa28.98■■■□□ 2.23
PDF-201ENST00000288022 GNASQ5JWF2 1037 aa28.98■■■□□ 2.23
PDF-201ENST00000288022 KLHDC9Q8NEP7 349 aa28.98■■■□□ 2.23
PDF-201ENST00000288022 SMARCC2Q8TAQ2 1214 aa28.98■■■□□ 2.23
PDF-201ENST00000288022 TSEN34Q9BSV6 310 aaKnown RBP28.98■■■□□ 2.23
PDF-201ENST00000288022 GNEQ9Y223 722 aaKnown RBP28.98■■■□□ 2.23
PDF-201ENST00000288022 H0YGN5 161 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 DYNC1LI2O43237 492 aaPredicted RBP28.97■■■□□ 2.23
PDF-201ENST00000288022 NR3C2P08235 984 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 MYCLP12524 364 aaPredicted RBP28.97■■■□□ 2.23
PDF-201ENST00000288022 PTGS1P23219 599 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 KCNA10Q16322 511 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 DUSP28Q4G0W2 176 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 TMEM63BQ5T3F8 832 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 SCFD2Q8WU76 684 aa28.97■■■□□ 2.23
PDF-201ENST00000288022 RBM47A0AV96 593 aaKnown RBP28.96■■■□□ 2.23
PDF-201ENST00000288022 CST5P28325 142 aaPredicted RBP28.96■■■□□ 2.23
PDF-201ENST00000288022 PDIA3P30101 505 aaKnown RBP28.96■■■□□ 2.23
PDF-201ENST00000288022 ACLYP53396 1101 aa28.96■■■□□ 2.23
PDF-201ENST00000288022 SEPT14Q6ZU15 432 aa28.96■■■□□ 2.23
PDF-201ENST00000288022 PCSK9Q8NBP7 692 aaKnown RBP28.96■■■□□ 2.23
PDF-201ENST00000288022 PDCD2LQ9BRP1 358 aa28.96■■■□□ 2.23
PDF-201ENST00000288022 LARP6Q9BRS8 491 aaKnown RBP28.96■■■□□ 2.23
PDF-201ENST00000288022 PSTPIP2Q9H939 334 aa28.96■■■□□ 2.23
PDF-201ENST00000288022 NID2Q14112 1375 aa28.96■■■□□ 2.23
PDF-201ENST00000288022 A0A1W2PQ45 241 aaPredicted RBP28.95■■■□□ 2.22
PDF-201ENST00000288022 A0A1W2PQY0 241 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 EVCP57679 992 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 CCT2P78371 535 aaKnown RBP28.95■■■□□ 2.22
PDF-201ENST00000288022 BEX3Q00994 111 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 PGM5Q15124 567 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 WWC2Q6AWC2 1192 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 USP17L6PQ6QN14 398 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 SLC39A5Q6ZMH5 540 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 Q9Y3F1 56 aa28.95■■■□□ 2.22
PDF-201ENST00000288022 MOXD2PA6NHM9 499 aa28.94■■■□□ 2.22
PDF-201ENST00000288022 EIF3JO75822 258 aaKnown RBP28.94■■■□□ 2.22
PDF-201ENST00000288022 TXNP10599 105 aaKnown RBP28.94■■■□□ 2.22
PDF-201ENST00000288022 NAPAP54920 295 aa28.94■■■□□ 2.22
PDF-201ENST00000288022 TTLL4Q14679 1199 aa28.94■■■□□ 2.22
PDF-201ENST00000288022 C8orf34Q49A92 452 aa28.94■■■□□ 2.22
PDF-201ENST00000288022 ASGR1P07306 291 aa28.93■■■□□ 2.22
PDF-201ENST00000288022 FSCN1Q16658 493 aaKnown RBP28.93■■■□□ 2.22
PDF-201ENST00000288022 CCSAPQ6IQ19 270 aaPredicted RBP28.93■■■□□ 2.22
PDF-201ENST00000288022 NCOA5Q9HCD5 579 aaKnown RBP28.93■■■□□ 2.22
PDF-201ENST00000288022 ATP11BQ9Y2G3 1177 aa28.93■■■□□ 2.22
PDF-201ENST00000288022 PIK3CDO00329 1044 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 MEIS2O14770 477 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 NKRFO15226 690 aaKnown RBP eCLIP28.92■■■□□ 2.22
PDF-201ENST00000288022 CTAGE5O15320 804 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 CCND2P30279 289 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 RTP1P59025 263 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 AKAP17AQ02040 695 aaKnown RBP28.92■■■□□ 2.22
PDF-201ENST00000288022 OR6J1Q8NGC5 347 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 IL31RAQ8NI17 732 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 VTI1AQ96AJ9 217 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 STARD7Q9NQZ5 370 aa28.92■■■□□ 2.22
PDF-201ENST00000288022 hCG_1984214I3L0E3 225 aa28.91■■■□□ 2.22
PDF-201ENST00000288022 ZEB2O60315 1214 aa28.91■■■□□ 2.22
PDF-201ENST00000288022 NKX3-2P78367 333 aa28.91■■■□□ 2.22
PDF-201ENST00000288022 STK3Q13188 491 aa28.91■■■□□ 2.22
PDF-201ENST00000288022 ZNF713Q8N859 430 aaPredicted RBP28.91■■■□□ 2.22
PDF-201ENST00000288022 PHKBQ93100 1093 aa28.91■■■□□ 2.22
PDF-201ENST00000288022 ZNF274Q96GC6 653 aaPredicted RBP28.91■■■□□ 2.22
PDF-201ENST00000288022 GLT1D1Q96MS3 346 aa28.91■■■□□ 2.22
PDF-201ENST00000288022 ZMYND8Q9ULU4 1186 aaPredicted RBP28.91■■■□□ 2.22
PDF-201ENST00000288022 ARIH2O95376 493 aa28.9■■■□□ 2.22
PDF-201ENST00000288022 UBE2SQ16763 222 aa28.9■■■□□ 2.22
PDF-201ENST00000288022 PPP1R18Q6NYC8 613 aa28.9■■■□□ 2.22
PDF-201ENST00000288022 VSIG10LQ86VR7 867 aa28.9■■■□□ 2.22
PDF-201ENST00000288022 COPS5Q92905 334 aa28.9■■■□□ 2.22
PDF-201ENST00000288022 ZFP91Q96JP5 570 aaPredicted RBP28.9■■■□□ 2.22
PDF-201ENST00000288022 RBM27Q9P2N5 1060 aaKnown RBP28.9■■■□□ 2.22
PDF-201ENST00000288022 MRVI1Q9Y6F6 885 aa28.9■■■□□ 2.22
PDF-201ENST00000288022 KIAA1217Q5T5P2 1943 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms