RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 NUDT12Q9BQG2 462 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 hCG_1984214I3L0E3 225 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 ZNF713Q8N859 430 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 LRWD1Q9UFC0 647 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
PPP4R1-201ENST00000285124 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 MEIS1O00470 390 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 CCDC192P0DO97 292 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 PPATQ06203 517 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 Q3C1V9 767 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 NCAPH2Q6IBW4 605 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 RNF207Q6ZRF8 634 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 LUZP1Q86V48 1076 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.63
PPP4R1-201ENST00000285124 ZNF157P51786 506 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 CNTN2Q02246 1040 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 CEP57L1Q8IYX8 460 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 FERMT2Q96AC1 680 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 RMDN3Q96TC7 470 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 TXNRD2Q9NNW7 524 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 ABT1Q9ULW3 272 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 PGK2P07205 417 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 STAT6P42226 847 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 ZNF445P59923 1031 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 CCL15Q16663 113 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 ARHGEF16Q5VV41 709 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 RRAGBQ5VZM2 374 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 KLHL10Q6JEL2 608 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 POTEEQ6S8J3 1075 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 KRBA2Q6ZNG9 492 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 PLA2G4DQ86XP0 818 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 CLEC4DQ8WXI8 215 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 SH2D3AQ9BRG2 576 aa11.08□□□□□ -0.64
PPP4R1-201ENST00000285124 BMP15O95972 392 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 ARP10275 920 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 TXLNAP40222 546 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 NOL9Q5SY16 702 aaKnown RBP11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 PPP1R18Q6NYC8 613 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 CABP7Q86V35 215 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 SMYD4Q8IYR2 804 aaPredicted RBP11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 ANKRD13CQ8N6S4 541 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 HAS1Q92839 578 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 WDR11Q9BZH6 1224 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 HERVK_113P62684 666 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 SNX29Q8TEQ0 813 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 ZNF214Q9UL59 606 aaPredicted RBP11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 SAMM50Q9Y512 469 aa11.07□□□□□ -0.64
PPP4R1-201ENST00000285124 FSTL1Q12841 308 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 SNAPC2Q13487 334 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 C11orf57Q6ZUT1 292 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 DYMQ7RTS9 669 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 EEF2KMTQ96G04 330 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 TEX13BQ9BXU2 312 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 ZHX3Q9H4I2 956 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 GINM1Q9NU53 330 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 KIAA1468Q9P260 1216 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 DPCR1Q3MIW9 517 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 BCAS3Q9H6U6 928 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 RGL1Q9NZL6 768 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 SYNPO2Q9UMS6 1093 aa11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
PPP4R1-201ENST00000285124 PDHXO00330 501 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 FOSP01100 380 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 PLCG1P19174 1290 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 ERCC3P19447 782 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 CCT6AP40227 531 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 ZNF165P49910 485 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 GLT8D2Q9H1C3 349 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 A1CFQ9NQ94 594 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 A0A0G2JLL6 359 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 BECN2A8MW95 431 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 MSH4O15457 936 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 IDEP14735 1019 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 STX17P56962 302 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 POSTNQ15063 836 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 PRRT2Q7Z6L0 340 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 MCF2L2Q86YR7 1114 aa11.05□□□□□ -0.64
PPP4R1-201ENST00000285124 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms