RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.43
GGPS1-201ENST00000282841 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.43
GGPS1-201ENST00000282841 MMTAG2Q9BU76 263 aaKnown RBP12.4□□□□□ -0.43
GGPS1-201ENST00000282841 ATAD5Q96QE3 1844 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 ZNF536O15090 1300 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 VGLL4Q14135 290 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-201ENST00000282841 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 DISC1Q9NRI5 854 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 LRWD1Q9UFC0 647 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
GGPS1-201ENST00000282841 BACE1P56817 501 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 KCNK18Q7Z418 384 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 RANBP17Q9H2T7 1088 aaKnown RBP12.39□□□□□ -0.43
GGPS1-201ENST00000282841 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
GGPS1-201ENST00000282841 ZNF76P36508 570 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 RAD51AP2Q09MP3 1159 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 TRMT1LQ7Z2T5 733 aaKnown RBP12.38□□□□□ -0.43
GGPS1-201ENST00000282841 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-201ENST00000282841 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 FEM1BQ9UK73 627 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 TRAF5O00463 557 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 EPHX2P34913 555 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 TXLNAP40222 546 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
GGPS1-201ENST00000282841 PLS1Q14651 629 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 UVSSAQ2YD98 709 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 MED15Q96RN5 788 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 BRCA2P51587 3418 aa12.38□□□□□ -0.43
GGPS1-201ENST00000282841 CHMP2AO43633 222 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 DPYDQ12882 1025 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 GDAQ9Y2T3 454 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 MEIS1O00470 390 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 NCAPHQ15003 741 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 NSMFQ6X4W1 530 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 DYMQ7RTS9 669 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 C17orf53Q8N3J3 647 aaPredicted RBP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 FANCLQ9NW38 375 aa12.37□□□□□ -0.43
GGPS1-201ENST00000282841 DICER1Q9UPY3 1922 aaKnown RBP12.37□□□□□ -0.43
GGPS1-201ENST00000282841 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 MCM6Q14566 821 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 SUPT20HL1Q3ZLR7 823 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 CTDP1Q9Y5B0 961 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 ABCB11O95342 1321 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 DDX39AO00148 427 aaKnown RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 SORBS3O60504 671 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 GRB10Q13322 594 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 IGSF22Q8N9C0 903 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 PNMA5Q96PV4 448 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 NAT10Q9H0A0 1025 aaKnown RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 HSD3B7Q9H2F3 369 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 SNCAIPQ9Y6H5 919 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 MORC3Q14149 939 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 NCAPH2Q6IBW4 605 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 R3HDMLQ9H3Y0 253 aa12.36□□□□□ -0.43
GGPS1-201ENST00000282841 HOOK1Q9UJC3 728 aaKnown RBP12.36□□□□□ -0.43
GGPS1-201ENST00000282841 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 POTECB2RU33 542 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 IRF6O14896 467 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 SMC2O95347 1197 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 EIF2AK2P19525 551 aaKnown RBP12.35□□□□□ -0.43
GGPS1-201ENST00000282841 ZNF75DP51815 510 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 LENG9Q96B70 501 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 CDCA5Q96FF9 252 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 SAMSN1Q9NSI8 373 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms