RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 CASC1Q6TDU7 716 aa22.54■■□□□ 1.2
MSGN1-201ENST00000281047 RNPC3Q96LT9 517 aaKnown RBP22.54■■□□□ 1.2
MSGN1-201ENST00000281047 MTA3Q9BTC8 594 aa22.54■■□□□ 1.2
MSGN1-201ENST00000281047 LSG1Q9H089 658 aaKnown RBP22.54■■□□□ 1.2
MSGN1-201ENST00000281047 MAP3K20Q9NYL2 800 aaKnown RBP22.54■■□□□ 1.2
MSGN1-201ENST00000281047 EPHB4P54760 987 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 ANTXR2P58335 489 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 TROAPQ12815 778 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 HOMER1Q86YM7 354 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 TMEM199Q8N511 208 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 SAMD3Q8N6K7 520 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 IGDCC4Q8TDY8 1250 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 RIOX1Q9H6W3 641 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 SENP2Q9HC62 589 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 COL20A1Q9P218 1284 aa22.53■■□□□ 1.2
MSGN1-201ENST00000281047 KPNA6O60684 536 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 MYL3P08590 195 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 HSD17B4P51659 736 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 PSMC6P62333 389 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 PURAQ00577 322 aaKnown RBP22.52■■□□□ 1.2
MSGN1-201ENST00000281047 GHRHRQ02643 423 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 MTG1Q9BT17 334 aaPredicted RBP22.52■■□□□ 1.2
MSGN1-201ENST00000281047 PPP1R12CQ9BZL4 782 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 ANO2Q9NQ90 1003 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 MTMR10Q9NXD2 777 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 GRIN2DO15399 1336 aa22.52■■□□□ 1.2
MSGN1-201ENST00000281047 PPP1R11O60927 126 aaPredicted RBP22.51■■□□□ 1.19
MSGN1-201ENST00000281047 EIF2AK2P19525 551 aaKnown RBP22.51■■□□□ 1.19
MSGN1-201ENST00000281047 MCM5P33992 734 aa22.51■■□□□ 1.19
MSGN1-201ENST00000281047 SMAD3P84022 425 aaKnown RBP22.51■■□□□ 1.19
MSGN1-201ENST00000281047 PIGSQ96S52 555 aa22.51■■□□□ 1.19
MSGN1-201ENST00000281047 MAP3K14Q99558 947 aa22.51■■□□□ 1.19
MSGN1-201ENST00000281047 MYH6P13533 1939 aa22.51■■□□□ 1.19
MSGN1-201ENST00000281047 PNMA6FA0A0J9YX94 578 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 A6NJR5 290 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 OPLAHO14841 1288 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 PRC1O43663 620 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 ZNF697Q5TEC3 545 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 SEPT14Q6ZU15 432 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 TMTC2Q8N394 836 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 CTCFLQ8NI51 663 aaPredicted RBP22.5■■□□□ 1.19
MSGN1-201ENST00000281047 COPS5Q92905 334 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 HIPK3Q9H422 1215 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 LY9Q9HBG7 655 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 PXMP2Q9NR77 195 aa22.5■■□□□ 1.19
MSGN1-201ENST00000281047 SLC27A2O14975 620 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 EIF3JO75822 258 aaKnown RBP22.49■■□□□ 1.19
MSGN1-201ENST00000281047 DDAH1O94760 285 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 ARIH2O95376 493 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 NR3C2P08235 984 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 SUPT20HL2P0C7V6 817 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 KIF5BP33176 963 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 SLC35G1Q2M3R5 365 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 CCDC62Q6P9F0 684 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 ZNF654Q8IZM8 581 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 TMEM87BQ96K49 555 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 TRPV6Q9H1D0 765 aa22.49■■□□□ 1.19
MSGN1-201ENST00000281047 ALDH8A1Q9H2A2 487 aaPredicted RBP22.49■■□□□ 1.19
MSGN1-201ENST00000281047 CYTH3O43739 400 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 B4GALT4O60513 344 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 GH1P01241 217 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 CSF2RAP15509 400 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 CYP2C18P33260 490 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 CREB3L3Q68CJ9 461 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 NFXL1Q6ZNB6 911 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 STXBP5LQ9Y2K9 1186 aa22.48■■□□□ 1.19
MSGN1-201ENST00000281047 CCDC69A6NI79 296 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 GCOM1H8Y6P7 765 aaPredicted RBP22.47■■□□□ 1.19
MSGN1-201ENST00000281047 POLR2MP0CAP2 368 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 NECTIN1Q15223 517 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 LY6KQ17RY6 165 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 RNF20Q5VTR2 975 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 PSRC1Q6PGN9 363 aaPredicted RBP22.47■■□□□ 1.19
MSGN1-201ENST00000281047 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.47■■□□□ 1.19
MSGN1-201ENST00000281047 LZTS2Q9BRK4 669 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 PDCD2LQ9BRP1 358 aa22.47■■□□□ 1.19
MSGN1-201ENST00000281047 HOXA13P31271 388 aaPredicted RBP22.46■■□□□ 1.19
MSGN1-201ENST00000281047 GNAQP50148 359 aa22.46■■□□□ 1.19
MSGN1-201ENST00000281047 NFRKBQ6P4R8 1299 aa22.46■■□□□ 1.19
MSGN1-201ENST00000281047 MYL10Q9BUA6 226 aa22.46■■□□□ 1.19
MSGN1-201ENST00000281047 NOC4LQ9BVI4 516 aaKnown RBP22.46■■□□□ 1.19
MSGN1-201ENST00000281047 SPZ1Q9BXG8 430 aa22.46■■□□□ 1.19
MSGN1-201ENST00000281047 MRVI1Q9Y6F6 885 aa22.46■■□□□ 1.19
MSGN1-201ENST00000281047 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.45■■□□□ 1.18
MSGN1-201ENST00000281047 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.45■■□□□ 1.18
MSGN1-201ENST00000281047 SH2B2O14492 632 aaPredicted RBP22.45■■□□□ 1.18
MSGN1-201ENST00000281047 CALM1P0DP23 149 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 CALM2P0DP24 149 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 CALM3P0DP25 149 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 MYCLP12524 364 aaPredicted RBP22.45■■□□□ 1.18
MSGN1-201ENST00000281047 SMARCA1P28370 1054 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 LIFRP42702 1097 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 PTPN11Q06124 597 aaPredicted RBP22.45■■□□□ 1.18
MSGN1-201ENST00000281047 ARHGAP1Q07960 439 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 NBPF20Q3BBV1 942 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 FAM47CQ5HY64 1035 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 TMEM240Q5SV17 173 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 KCNV1Q6PIU1 500 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 SKAP1Q86WV1 359 aa22.45■■□□□ 1.18
MSGN1-201ENST00000281047 AFG1LQ8WV93 481 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms