RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 MYL1P05976 194 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 CCDC6Q16204 474 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 RPGRIP1Q96KN7 1286 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 STIM2Q9P246 746 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 ZHX1Q9UKY1 873 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 ATP5DP30049 168 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 CASP14P31944 242 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 SCARF1Q14162 830 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 GIMAP7Q8NHV1 300 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 OGFRQ9NZT2 677 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 OSBPP22059 807 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 HOXA13P31271 388 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 MAIP1Q8WWC4 291 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 ANO3Q9BYT9 981 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-201ENST00000277575 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
USP6NL-201ENST00000277575 KCNK3O14649 394 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 ALX1Q15699 326 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 LONRF2Q1L5Z9 754 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 ZNF658Q5TYW1 1059 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 ARL6IP4Q66PJ3 421 aaKnown RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 CCDC121Q6ZUS5 278 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 CCDC125Q86Z20 511 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 SAMD15Q9P1V8 674 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 HESX1Q9UBX0 185 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 NEDD4P46934 1319 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 FAM196BA6NMK8 535 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 PLCG1P19174 1290 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 ENAHQ8N8S7 591 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 MAN1B1Q9UKM7 699 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 JCADQ9P266 1359 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 NRKQ7Z2Y5 1582 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 E9PCH4 1651 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 ZBTB7AO95365 584 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 IFNB1P01574 187 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 PDE6CP51160 858 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 EEPD1Q7L9B9 569 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 FAM186BQ8IYM0 893 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 SERPINA10Q9UK55 444 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 BUB1O43683 1085 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 ECE2O60344 883 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 IGSF3O75054 1194 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 PTPROQ16827 1216 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 SLC17A8Q8NDX2 589 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 MTA3Q9BTC8 594 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 TRIM7Q9C029 511 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 DDX41Q9UJV9 622 aaKnown RBP12.36□□□□□ -0.43
USP6NL-201ENST00000277575 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
USP6NL-201ENST00000277575 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 GSG1L2A8MUP6 293 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 VIMP08670 466 aaKnown RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 ALDH3A1P30838 453 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 LACTBP83111 547 aaPredicted RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 TFDP1Q14186 410 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 RIOK1Q9BRS2 568 aaKnown RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 MROH7-TTC4A0A0A0MT08 1334 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 UTYO14607 1347 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 SEPT2Q15019 361 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 MAN2A1Q16706 1144 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 MB21D2Q8IYB1 491 aaPredicted RBP12.35□□□□□ -0.43
USP6NL-201ENST00000277575 NT5C1BQ96P26 610 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 PLEKHA4Q9H4M7 779 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 KMT5AQ9NQR1 393 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 CEP152O94986 1710 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 RFX7Q2KHR2 1363 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 GOLGA6BA6NDN3 693 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 CCNE1P24864 410 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 SNAP25P60880 206 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 FAM184BQ9ULE4 1060 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
USP6NL-201ENST00000277575 CLIC2O15247 247 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 PLA2G4BP0C869 781 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 PTK2Q05397 1052 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms