RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SYT2Q8N9I0 419 aaPredicted RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 MYO1CO00159 1063 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 MCF2LO15068 1137 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 NEK2P51955 445 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 SLFNL1Q499Z3 407 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 FANCBQ8NB91 859 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 PANX2Q96RD6 677 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 PCDHA12Q9UN75 941 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 WDR7Q9Y4E6 1490 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 SCG2P13521 617 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 EIF6P56537 245 aaKnown RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 MDM2Q00987 491 aaPredicted RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 SLC39A14Q15043 492 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 PAWRQ96IZ0 340 aaKnown RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 IQGAP2Q13576 1575 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 TMEM191BP0C7N4 346 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 KCNA4P22459 653 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 NDUFA8P51970 172 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 MESDQ14696 234 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 C16orf87Q6PH81 154 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ADAT2Q7Z6V5 191 aaKnown RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ADPGKQ9BRR6 497 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 TEKT3Q9BXF9 490 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 TEKT2Q9UIF3 430 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 TOPBP1Q92547 1522 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 CCDC188H7C350 402 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 LPXNO60711 386 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 AFPP02771 609 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 SAT1P21673 171 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 RBL2Q08999 1139 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 EYA1Q99502 592 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 ZMYND12Q9H0C1 365 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 MRPL47Q9HD33 250 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 MAPK4P31152 587 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TERF2Q15554 542 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 G2E3Q7L622 706 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 FGD4Q96M96 766 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 ABCC12Q96J65 1359 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 CHEK2O96017 543 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 FOSP01100 380 aaPredicted RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TECP42680 631 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 HNRNPH2P55795 449 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 ZBED6P86452 979 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 NAA35Q5VZE5 725 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 NSMFQ6X4W1 530 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TMCO5AQ8N6Q1 288 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 CEP70Q8NHQ1 597 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 P2RX5Q93086 422 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TTC1Q99614 292 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 PTPN22Q9Y2R2 807 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 MRPL11Q9Y3B7 192 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 CHL1O00533 1208 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 FSCBQ5H9T9 825 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 AATFQ9NY61 560 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 KIAA0232Q92628 1395 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 EXOC1LA0A1B0GW35 172 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 NVLO15381 856 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 GRM1Q13255 1194 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 KAZNQ674X7 775 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 MCUQ8NE86 351 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 HNRNPCL2B2RXH8 293 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 HNRNPCL1O60812 293 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT10P13645 584 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 HDAC4P56524 1084 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TMTC4Q5T4D3 741 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TTBK2Q6IQ55 1244 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TBC1D1Q86TI0 1168 aaPredicted RBP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 VSTM4Q8IW00 320 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF653Q96CK0 615 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 THAP9Q9H5L6 903 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 SMYD2Q9NRG4 433 aa9.43□□□□□ -0.9
SCUBE3-201ENST00000274938 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 TRPM2O94759 1503 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ENC1O14682 589 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 TOM1L1O75674 476 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 NOP14P78316 857 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 DMP1Q13316 513 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT39Q6A163 491 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 FAM186BQ8IYM0 893 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ENOX1Q8TC92 643 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 NUDCD1Q96RS6 583 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 TRIM55Q9BYV6 548 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 FOXP1Q9H334 677 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 PSTPIP2Q9H939 334 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms