RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CATSPER2Q96P56 530 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 CHMP2BQ9UQN3 213 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 THAP12O43422 761 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 GPSM2P81274 684 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 ARMC4Q5T2S8 1044 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 JAZF1Q86VZ6 243 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 RAVER1Q8IY67 606 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 GOLM1Q8NBJ4 401 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 NPLOC4Q8TAT6 608 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 PCDH18Q9HCL0 1135 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 ZBTB1Q9Y2K1 713 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 TET3O43151 1660 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 INSRP06213 1382 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 PRLP01236 227 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 ZBTB41Q5SVQ8 909 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 MTMR12Q9C0I1 747 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 ST18O60284 1047 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 MBD3O95983 291 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 S100A6P06703 90 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 FESP07332 822 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 COPAP53621 1224 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 STK11Q15831 433 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 PROSER3Q2NL68 480 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 LINC00469Q8N7U9 141 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 SH3TC2Q8TF17 1288 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 PRPF18Q99633 342 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 SERHL2Q9H4I8 314 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 ERICH2A1L162 156 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 MTHFSP49914 203 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 PKN1Q16512 942 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 MAJINQ3KP22 176 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 WDR45BQ5MNZ6 344 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 SRGAP1Q7Z6B7 1085 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 LILRB2Q8N423 598 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 FAM200AQ8TCP9 573 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 COG3Q96JB2 828 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 MRPL9Q9BYD2 267 aaKnown RBP9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 CLSTN2Q9H4D0 955 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 PRM3Q9NNZ6 103 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 MROH2AA6NES4 1674 aa9.71□□□□□ -0.85
CTDSPL-201ENST00000273179 FOXD2O60548 495 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 ZMYND10O75800 440 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 IQCEQ6IPM2 695 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 KRT77Q7Z794 578 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 RUFY2Q8WXA3 655 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 MRPL46Q9H2W6 279 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 FARSBQ9NSD9 589 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 GMEB1Q9Y692 573 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 TRIM75PA6NK02 468 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 TTC34A8MYJ7 566 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 C19orf81C9J6K1 198 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 SRGAP3O43295 1099 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 GFPT2O94808 682 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 CPP00450 1065 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 BCRP11274 1271 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 FBLN1P23142 703 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 DNAJB2P25686 324 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 ST13P50502 369 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 LMNB2Q03252 620 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 AP1B1Q10567 949 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 PUM3Q15397 648 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 IGSF11Q5DX21 431 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 GRAMD2AQ8IUY3 354 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 IQCDQ96DY2 449 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 ZBED2Q9BTP6 218 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 DEPDC5O75140 1603 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 ABCA6Q8N139 1617 aa9.71□□□□□ -0.86
CTDSPL-201ENST00000273179 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 GOLGA8SH3BPF8 625 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 RASA1P20936 1047 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 HOXD12P35452 270 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 CCT5P48643 541 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PRR23CQ6ZRP0 262 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 WDR60Q8WVS4 1066 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 HOOK2Q96ED9 719 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 NUDT16L1Q9BRJ7 211 aaKnown RBP9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PLEKHA4Q9H4M7 779 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 KLC4Q9NSK0 619 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ATAD3AQ9NVI7 634 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 TUBGCP4Q9UGJ1 667 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 FAM50BQ9Y247 325 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 FAM169AQ9Y6X4 670 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 GSTTP1A0A1W2PQM5 241 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 TMEM247A6NEH6 219 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 E9PMD0 336 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 GOLGA8RI6L899 631 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 RNF40O75150 1001 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PHACTR2O75167 634 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 NPPAP01160 153 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ADCY8P40145 1251 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PPP1R2P41236 205 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 MAP3K11Q16584 847 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms