RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CCDC70Q6NSX1 233 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 USP49Q70CQ1 688 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 OR2W6PQ8NHA6 318 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 OSBPL1AQ9BXW6 950 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 ZFATQ9P243 1243 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 ZNF232Q9UNY5 417 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 SMIM24O75264 130 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 NCAPG2Q86XI2 1143 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 TAB2Q9NYJ8 693 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 NOP53Q9NZM5 478 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 SLC12A6Q9UHW9 1150 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 DACH1Q9UI36 760 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 A8MUI8 341 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 N4BP3O15049 544 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 SCNN1BP51168 640 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 MTA1Q13330 715 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 CUL4BQ13620 913 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 ERICH1Q86X53 443 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 IFT81Q8WYA0 676 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 C8orf37Q96NL8 207 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 ALS2CR12Q96Q35 445 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 TMEM165Q9HC07 324 aa17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 CNOT8Q9UFF9 292 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-201ENST00000273062 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 PPP4R3AQ6IN85 833 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 NFRKBQ6P4R8 1299 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 WDR59Q6PJI9 974 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 ITIH6Q6UXX5 1313 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 TTC26A0AVF1 554 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 FERP16591 822 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 ERCC5P28715 1186 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 ADD2P35612 726 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 CYP27A1Q02318 531 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 GLE1Q53GS7 698 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 FAM182BQ5T319 152 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 MAATS1Q7Z4T9 603 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 CCDC63Q8NA47 563 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 NLRP3Q96P20 1036 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 SENP2Q9HC62 589 aa17.36■□□□□ 0.37
CTDSP1-201ENST00000273062 KLF18A0A0U1RQI7 1052 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 NTSR2O95665 410 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 FGFR2P21802 821 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 C3orf67Q6ZVT6 689 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 LINC00116Q8NCU8 138 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 RAPGEF5Q92565 580 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 RBM12Q9NTZ6 932 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 ZNF532Q9HCE3 1301 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 LRP5O75197 1615 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 DCDC2CA8MYV0 355 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 GCLCP48506 637 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 KCNJ2P63252 427 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 PDIA5Q14554 519 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 SNX12Q9UMY4 172 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 CAPN6Q9Y6Q1 641 aa17.35■□□□□ 0.37
CTDSP1-201ENST00000273062 C5orf60A6NFR6 353 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 RASGRF1Q13972 1273 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 IQCEQ6IPM2 695 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ARHGAP22Q7Z5H3 698 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 KCNV2Q8TDN2 545 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 AGAP1Q9UPQ3 857 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 PLAAQ9Y263 795 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 PES1O00541 588 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 CPLX1O14810 134 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ZSCAN9O15535 394 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 EVI5O60447 810 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 AFMP43652 599 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 IMMTQ16891 758 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 FAM81AQ8TBF8 368 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 LPIN2Q92539 896 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 KDM4CQ9H3R0 1056 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 KCNMB3Q9NPA1 279 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 PCDHGA4Q9Y5G9 962 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 HMGB1P1B2RPK0 211 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ACTN4O43707 911 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 RXRAP19793 462 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ANTXR2P58335 489 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ANKRD20A2Q5SQ80 823 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ANKRD20A1Q5TYW2 823 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 ANKRD20A3Q5VUR7 823 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 TRIM68Q6AZZ1 485 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 MTHFD1LQ6UB35 978 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 GORASP1Q9BQQ3 440 aa17.34■□□□□ 0.37
CTDSP1-201ENST00000273062 MROH5Q6ZUA9 1318 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 TRIM37O94972 964 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 PDE6AP16499 860 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 BCAMP50895 628 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 VAV2P52735 878 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 FAM133BQ5BKY9 247 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 KRT40Q6A162 431 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 C8orf74Q6P047 294 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms