RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 PRR29P0C7W0 189 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 H2AFXP16104 143 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CALML3P27482 149 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 GTF2A2P52657 109 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 ATP2C1P98194 919 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 SEMA3FQ13275 785 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 NAA30Q147X3 362 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 NR1I3Q14994 352 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 ELF2Q15723 593 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 KMT5BQ4FZB7 885 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 KIAA1755Q5JYT7 1200 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 SPECC1Q5M775 1068 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 PRRT2Q7Z6L0 340 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 KRT222Q8N1A0 295 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 LRRC47Q8N1G4 583 aaKnown RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CCDC82Q8N4S0 544 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 TC2NQ8N9U0 490 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CTCFLQ8NI51 663 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 NAA15Q9BXJ9 866 aaKnown RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 KANSL2Q9H9L4 492 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 MTMR4Q9NYA4 1195 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 FAM53CQ9NYF3 392 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 VPS54Q9P1Q0 977 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 PLIN4Q96Q06 1357 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 MANSC4A6NHS7 340 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 EFCAB8A8MWE9 144 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 USP17L10C9JJH3 530 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 IGF2BP3O00425 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CXCL11O14625 94 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 RAD21O60216 631 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CETPP11597 493 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 KIF5BP33176 963 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 BACE1P56817 501 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CUL4BQ13620 913 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 TTC38Q5R3I4 469 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 TREML2Q5T2D2 321 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 ARL6IP4Q66PJ3 421 aaKnown RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 GPAT2Q6NUI2 795 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 SPICE1Q8N0Z3 855 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CMTR1Q8N1G2 835 aaKnown RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 IQUBQ8NA54 791 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CCDC51Q96ER9 411 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 PAGE5Q96GU1 130 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 SH3GLB2Q9NR46 395 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
TRIM43-201ENST00000272395 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
TRIM43-201ENST00000272395 CNTNAP5Q8WYK1 1306 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 SYNRGQ9UMZ2 1314 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 PCNTO95613 3336 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 BTBD19C9JJ37 291 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 KIF20AO95235 890 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 SCG2P13521 617 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 MAP2K2P36507 400 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 DPYDQ12882 1025 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 FILIP1LQ4L180 1135 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 CDKAL1Q5VV42 579 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 FBXO38Q6PIJ6 1188 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 RASGRP2Q7LDG7 609 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 IFNL1Q8IU54 200 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 CREBRFQ8IUR6 639 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 PDILTQ8N807 584 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 MNS1Q8NEH6 495 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 UBXN4Q92575 508 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 SYMPKQ92797 1274 aaKnown RBP9.82□□□□□ -0.84
TRIM43-201ENST00000272395 DHX58Q96C10 678 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 KIAA1683Q9H0B3 1180 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 ARHGEF10LQ9HCE6 1279 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 ARGLU1Q9NWB6 273 aaPredicted RBP9.82□□□□□ -0.84
TRIM43-201ENST00000272395 STX8Q9UNK0 236 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 MTMR7Q9Y216 660 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 ITIH6Q6UXX5 1313 aa9.82□□□□□ -0.84
TRIM43-201ENST00000272395 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
TRIM43-201ENST00000272395 AKR1B15C9JRZ8 316 aaPredicted RBP9.81□□□□□ -0.84
TRIM43-201ENST00000272395 PLEKHA8P1O95397 391 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 TTLL1O95922 423 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 ATP2B1P20020 1258 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 SPAG1Q07617 926 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 SREBF2Q12772 1141 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 TUBB2AQ13885 445 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 BMS1Q14692 1282 aaKnown RBP9.81□□□□□ -0.84
TRIM43-201ENST00000272395 NPY5RQ15761 445 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 PFKFB3Q16875 520 aaPredicted RBP9.81□□□□□ -0.84
TRIM43-201ENST00000272395 RCSD1Q6JBY9 416 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 USP17L2Q6R6M4 530 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 USP49Q70CQ1 688 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 PPFIBP1Q86W92 1011 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 SHISA4Q96DD7 197 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 EPSTI1Q96J88 318 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 NUP88Q99567 741 aaPredicted RBP9.81□□□□□ -0.84
TRIM43-201ENST00000272395 TUBB2BQ9BVA1 445 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 RMND1Q9NWS8 449 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 NYAP2Q9P242 653 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 PRDM4Q9UKN5 801 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 TMX2Q9Y320 296 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 ATAD5Q96QE3 1844 aa9.81□□□□□ -0.84
TRIM43-201ENST00000272395 A0A087X0B3 334 aa9.8□□□□□ -0.84
TRIM43-201ENST00000272395 VWA3AA6NCI4 1184 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms