RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 TSC1Q92574 1164 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 KIFC2Q96AC6 838 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 VTI1AQ96AJ9 217 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 ZNF830Q96NB3 372 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 SLF1Q9BQI6 1058 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 DCTPP1Q9H773 170 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 CXXC1Q9P0U4 656 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 CLIP2Q9UDT6 1046 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 CTNNA3Q9UI47 895 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 ASTN1O14525 1302 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 UMODL1Q5DID0 1318 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 MOXD2PA6NHM9 499 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 GSG1L2A8MUP6 293 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 MINDY4BA8MYZ0 360 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 KIF2AO00139 706 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 TNFRSF10AO00220 468 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 NEMFO60524 1076 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 DUSP11O75319 330 aaKnown RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 PRDM1O75626 825 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 COL9A1P20849 921 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 UBE3CQ15386 1083 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 TERF2Q15554 542 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 GNASQ5JWF2 1037 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 TEX35Q5T0J7 233 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 FOXD4L5Q5VV16 416 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 MAMDC4Q6UXC1 1216 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 ZNF467Q7Z7K2 595 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 FAM126BQ8IXS8 530 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 FOXD4L4Q8WXT5 416 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 SYMPKQ92797 1274 aaKnown RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 GLT1D1Q96MS3 346 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 STRBPQ96SI9 672 aaKnown RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 TEX13BQ9BXU2 312 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 KATNBL1Q9H079 304 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 HOMER2Q9NSB8 354 aa7.57□□□□□ -1.2
CD53-201ENST00000271324 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.57□□□□□ -1.2
CD53-201ENST00000271324 PRRC2BQ5JSZ5 2229 aaKnown RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 TET1Q8NFU7 2136 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 IGKV6D-41A0A0C4DH26 115 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 ARVCFO00192 962 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 CD4P01730 458 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 TNNT1P13805 278 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 MYOGP15173 224 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 SDSP20132 328 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 CST5P28325 142 aaPredicted RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 RABGGTBP53611 331 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 GJA9P57773 515 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 SNAP25P60880 206 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 TSHZ3Q63HK5 1081 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 ARMCX2Q7L311 632 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 AMOTL1Q8IY63 956 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 DRC7Q8IY82 874 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 CCDC144CPQ8IYA2 1237 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 LRRC47Q8N1G4 583 aaKnown RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 ANKRD35Q8N283 1001 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 KIF18AQ8NI77 898 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
CD53-201ENST00000271324 UPF3AQ9H1J1 476 aaKnown RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 NKX2-4Q9H2Z4 354 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 MKNK2Q9HBH9 465 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 SLC38A10Q9HBR0 1119 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 NYAP2Q9P242 653 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
CD53-201ENST00000271324 YBX2Q9Y2T7 364 aaKnown RBP7.56□□□□□ -1.2
CD53-201ENST00000271324 GRIN2DO15399 1336 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 ELP1O95163 1332 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 SOWAHBA6NEL2 793 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 ZBED4O75132 1171 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 SLFN14P0C7P3 912 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 IGFBP4P22692 258 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 COPB2P35606 906 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 CCL23P55773 120 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 PPIGQ13427 754 aaKnown RBP eCLIP7.55□□□□□ -1.2
CD53-201ENST00000271324 TPD52L1Q16890 204 aaPredicted RBP7.55□□□□□ -1.2
CD53-201ENST00000271324 CXCL17Q6UXB2 119 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 RASGRP2Q7LDG7 609 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 OTOP2Q7RTS6 562 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 MSL3Q8N5Y2 521 aaKnown RBP7.55□□□□□ -1.2
CD53-201ENST00000271324 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 MARVELD3Q96A59 401 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 VWCEQ96DN2 955 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 CEP95Q96GE4 821 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 AGBL1Q96MI9 1066 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 NECAB3Q96P71 396 aaPredicted RBP7.55□□□□□ -1.2
CD53-201ENST00000271324 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
CD53-201ENST00000271324 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
CD53-201ENST00000271324 TRPV6Q9H1D0 765 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 PDGFCQ9NRA1 345 aa7.55□□□□□ -1.2
CD53-201ENST00000271324 ARPP21Q9UBL0 812 aaPredicted RBP7.55□□□□□ -1.2
CD53-201ENST00000271324 TCHHQ07283 1943 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 M0R2C6 588 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms