RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 SMYD4Q8IYR2 804 aaPredicted RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 SRBD1Q8N5C6 995 aaKnown RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 LZTS2Q9BRK4 669 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 TRPM3Q9HCF6 1732 aaPredicted RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 RPAP1Q9BWH6 1393 aaPredicted RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 EEF2P13639 858 aaKnown RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 PCK1P35558 622 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 PDE4DQ08499 809 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 VPS16Q9H269 839 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 PCDHA5Q9Y5H7 936 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 PSMA7O14818 248 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 ADCY2Q08462 1091 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 SLC30A9Q6PML9 568 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 SDCCAG8Q86SQ7 713 aaPredicted RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 SULF1Q8IWU6 871 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 PSMD14O00487 310 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 SH3BGRP55822 239 aaPredicted RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 KIF4BQ2VIQ3 1234 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 ZFYVE27Q5T4F4 411 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 B4GALNT2Q8NHY0 566 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 BCAS4Q8TDM0 211 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 DDX12PQ92771 950 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 ABTB1Q969K4 478 aaPredicted RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 TSG101Q99816 390 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 PDE11AQ9HCR9 933 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 NFE2L3Q9Y4A8 694 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L20D6RJB6 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 BACH1O14867 736 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 CMA1P23946 247 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L24Q0WX57 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 SAMD7Q7Z3H4 446 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 NEK8Q86SG6 692 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 CABP7Q86V35 215 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 SGMS1Q86VZ5 419 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
CDH2-201ENST00000269141 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
CDH2-201ENST00000269141 MYL5Q02045 173 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
CDH2-201ENST00000269141 FAM76AQ8TAV0 307 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 MTRQ99707 1265 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 BCL9LQ86UU0 1499 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 USP17L10C9JJH3 530 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 PSMC4P43686 418 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
CDH2-201ENST00000269141 CCDC65Q8IXS2 484 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 FOXP1Q9H334 677 aaPredicted RBP12.35□□□□□ -0.43
CDH2-201ENST00000269141 HPS5Q9UPZ3 1129 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 PCDHAC2Q9Y5I4 1007 aa12.35□□□□□ -0.43
CDH2-201ENST00000269141 ALS2Q96Q42 1657 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 MYBL2P10244 700 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 BMP3P12645 472 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 CRYMQ14894 314 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 FKBP15Q5T1M5 1219 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
CDH2-201ENST00000269141 ZNF341Q9BYN7 854 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 POLR3EQ9NVU0 708 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 PLSCR1O15162 318 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 PPFIA2O75334 1257 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 TRIM21P19474 475 aaKnown RBP12.34□□□□□ -0.43
CDH2-201ENST00000269141 ARID5AQ03989 594 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 DPCR1Q3MIW9 517 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 STRIP1Q5VSL9 837 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 GOLGA1Q92805 767 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 POLD4Q9HCU8 107 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 PCDHA12Q9UN75 941 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
CDH2-201ENST00000269141 SNX1Q13596 522 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 TMCO5AQ8N6Q1 288 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 RMND1Q9NWS8 449 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 TMEM260Q9NX78 707 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
CDH2-201ENST00000269141 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms