RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SREBF1P36956 1147 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 NOL9Q5SY16 702 aaKnown RBP23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 MBOAT7Q96N66 472 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 RAB34Q9BZG1 259 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 GTPBP6O43824 516 aaPredicted RBP23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 ICAM1P05362 532 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 CASP1P29466 404 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 PDIA5Q14554 519 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 NAALADL2Q58DX5 795 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 STAMQ92783 540 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 HAS1Q92839 578 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 MTRQ99707 1265 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 RPAP3Q9H6T3 665 aaPredicted RBP23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 LRWD1Q9UFC0 647 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 ZHX2Q9Y6X8 837 aa23.18■■□□□ 1.3
LYSMD2-201ENST00000267838 SMTNL1A8MU46 457 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 GCOM1H8Y6P7 765 aaPredicted RBP23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 CFBP00751 764 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 POLR2MP0CAP2 368 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 SULF1Q8IWU6 871 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 GSDMAQ96QA5 445 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 TTC12Q9H892 705 aaPredicted RBP23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 ZNF536O15090 1300 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 MARCH6O60337 910 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 USP2O75604 605 aaPredicted RBP23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 FLOT1O75955 427 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 MLKLQ8NB16 471 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 TBC1D5Q92609 795 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 L3MBTL3Q96JM7 780 aaPredicted RBP23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 PLIN2Q99541 437 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 MMTAG2Q9BU76 263 aaKnown RBP23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 CUEDC2Q9H467 287 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 CCPG1Q9ULG6 757 aa23.17■■□□□ 1.3
LYSMD2-201ENST00000267838 ADM5C9JUS6 153 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 IKBKBO14920 756 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 PRKG1Q13976 671 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 SARM1Q6SZW1 724 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 FCHSD1Q86WN1 690 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 MYRIPQ8NFW9 859 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 AGBL1Q96MI9 1066 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 TRIM5Q9C035 493 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 BLZF1Q9H2G9 400 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 DACH1Q9UI36 760 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 PPP1R9AQ9ULJ8 1098 aa23.16■■□□□ 1.3
LYSMD2-201ENST00000267838 C19orf81C9J6K1 198 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 PLCG1P19174 1290 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 CUL4BQ13620 913 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 NCAPHQ15003 741 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 GPR162Q16538 588 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 DLK2Q6UY11 383 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 CALML4Q96GE6 196 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 C12orf42Q96LP6 360 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 SLC38A10Q9HBR0 1119 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 KCNMB3Q9NPA1 279 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 PARP14Q460N5 1801 aa23.15■■□□□ 1.3
LYSMD2-201ENST00000267838 POTEMA6NI47 508 aa23.14■■□□□ 1.3
LYSMD2-201ENST00000267838 CYP3A4P08684 503 aa23.14■■□□□ 1.3
LYSMD2-201ENST00000267838 Q4G0T1 1027 aa23.14■■□□□ 1.3
LYSMD2-201ENST00000267838 PLA2G4DQ86XP0 818 aa23.14■■□□□ 1.3
LYSMD2-201ENST00000267838 ZNF830Q96NB3 372 aaPredicted RBP23.14■■□□□ 1.3
LYSMD2-201ENST00000267838 MAGEF1Q9HAY2 307 aa23.14■■□□□ 1.3
LYSMD2-201ENST00000267838 CIITAP33076 1130 aa23.14■■□□□ 1.29
LYSMD2-201ENST00000267838 ZNF75DP51815 510 aa23.14■■□□□ 1.29
LYSMD2-201ENST00000267838 TPM4P67936 248 aa23.14■■□□□ 1.29
LYSMD2-201ENST00000267838 USP50Q70EL3 339 aaPredicted RBP23.14■■□□□ 1.29
LYSMD2-201ENST00000267838 LRRC15Q8TF66 581 aa23.14■■□□□ 1.29
LYSMD2-201ENST00000267838 PCDHA12Q9UN75 941 aa23.14■■□□□ 1.29
LYSMD2-201ENST00000267838 HMGCS2P54868 508 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 MYL5Q02045 173 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 PRR16Q569H4 304 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 KRT26Q7Z3Y9 468 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 GJA10Q969M2 543 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 KBTBD4Q9NVX7 518 aa23.13■■□□□ 1.29
LYSMD2-201ENST00000267838 MYL1P05976 194 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 FDX1P10109 184 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 MAP3K9P80192 1104 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 KRT79Q5XKE5 535 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 CPXCR1Q8N123 301 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 EHMT1Q9H9B1 1298 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 RAVER2Q9HCJ3 691 aaKnown RBP23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 AFG3L2Q9Y4W6 797 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 CTDP1Q9Y5B0 961 aaPredicted RBP23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 PAPPA2Q9BXP8 1791 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 FAM86B1E9PN63 330 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 TBX3O15119 743 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 ZBED4O75132 1171 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 FAM86B2P0C5J1 330 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 EPHX2P34913 555 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 GRB10Q13322 594 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 ETNPPLQ8TBG4 499 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 KIAA1524Q8TCG1 905 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 SNX29Q8TEQ0 813 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 LENG9Q96B70 501 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 SNCAIPQ9Y6H5 919 aa23.12■■□□□ 1.29
LYSMD2-201ENST00000267838 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 PPP1R12BO60237 982 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms