RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 GMCL1Q96IK5 515 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 BAG1Q99933 345 aaPredicted RBP18.94■□□□□ 0.62
CHKA-201ENST00000265689 BLOC1S4Q9NUP1 217 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 PAXBP1Q9Y5B6 917 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 KCNJ18B7U540 433 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 PDE4DQ08499 809 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 KCNJ12Q14500 433 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 TCP11X2Q5H9J9 407 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 ARHGAP27Q6ZUM4 889 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 CCDC84Q86UT8 332 aaPredicted RBP18.94■□□□□ 0.62
CHKA-201ENST00000265689 VPS16Q9H269 839 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 TAB2Q9NYJ8 693 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 HDAC9Q9UKV0 1011 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 CENPFP49454 3210 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 PDIA5Q14554 519 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 MCM6Q14566 821 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 TBC1D10BQ4KMP7 808 aaPredicted RBP18.93■□□□□ 0.62
CHKA-201ENST00000265689 CIAPIN1Q6FI81 312 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 CPLX3Q8WVH0 158 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
CHKA-201ENST00000265689 MYH7BA7E2Y1 1941 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 LRRC10BA6NIK2 292 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 WNT10BO00744 389 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 N4BP3O15049 544 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 BMP3P12645 472 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 ECE1P42892 770 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 RBL2Q08999 1139 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 USH1GQ495M9 461 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 SYDE2Q5VT97 1194 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 PRAMEF18Q5VWM3 479 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 DLK2Q6UY11 383 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 IRF2BP1Q8IU81 584 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 SNX29Q8TEQ0 813 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 SPON1Q9HCB6 807 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 EXOC1Q9NV70 894 aa18.93■□□□□ 0.62
CHKA-201ENST00000265689 HERC5Q9UII4 1024 aaKnown RBP18.93■□□□□ 0.62
CHKA-201ENST00000265689 CNTNAP1P78357 1384 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 MEIS2O14770 477 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 FCER1AP12319 257 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 COPB1P53618 953 aaKnown RBP18.92■□□□□ 0.62
CHKA-201ENST00000265689 STK4Q13043 487 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 SV2BQ7L1I2 683 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 FAM151AQ8WW52 585 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 HPS3Q969F9 1004 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 CDK5RAP3Q96JB5 506 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
CHKA-201ENST00000265689 ANO3Q9BYT9 981 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 RAB34Q9BZG1 259 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 AKR1B15C9JRZ8 316 aaPredicted RBP18.92■□□□□ 0.62
CHKA-201ENST00000265689 H7C1D1 291 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 PSMA7O14818 248 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 ARHGAP6O43182 974 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 MARCH6O60337 910 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 AMPD3Q01432 767 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 SPAG1Q07617 926 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 STIM1Q13586 685 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 GLT8D2Q9H1C3 349 aa18.92■□□□□ 0.62
CHKA-201ENST00000265689 MYMKA6NI61 221 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 GMPSP49915 693 aaPredicted RBP18.91■□□□□ 0.62
CHKA-201ENST00000265689 KIAA1755Q5JYT7 1200 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 KRT79Q5XKE5 535 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 KCNK18Q7Z418 384 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 PPFIBP1Q86W92 1011 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 FBXO11Q86XK2 927 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 ACER1Q8TDN7 264 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 STK17AQ9UEE5 414 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 STX10O60499 249 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 GCFC2P16383 781 aaKnown RBP18.91■□□□□ 0.62
CHKA-201ENST00000265689 SEMA3FQ13275 785 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 ECM1Q16610 540 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 SPDYE2Q495Y8 402 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
CHKA-201ENST00000265689 TRIM47Q96LD4 638 aa18.91■□□□□ 0.62
CHKA-201ENST00000265689 ARFGEF1Q9Y6D6 1849 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 TTI2Q6NXR4 508 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 LARP4BQ92615 738 aaKnown RBP18.9■□□□□ 0.62
CHKA-201ENST00000265689 SRRTQ9BXP5 876 aaKnown RBP18.9■□□□□ 0.62
CHKA-201ENST00000265689 MYOZ2Q9NPC6 264 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 PCDHA12Q9UN75 941 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 DYMQ7RTS9 669 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 REXO1L1PQ8IX06 675 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 ANKRD20A12PQ8NF67 263 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 KIF18AQ8NI77 898 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 RAD54LQ92698 747 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 ARID3AQ99856 593 aa18.9■□□□□ 0.62
CHKA-201ENST00000265689 DUSP9Q99956 384 aaKnown RBP18.9■□□□□ 0.62
CHKA-201ENST00000265689 TMEM119Q4V9L6 283 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 SYT10Q6XYQ8 523 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 TOGARAM2Q6ZUX3 1019 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 MICALL2Q8IY33 904 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 EEF2KMTQ96G04 330 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 DHTKD1Q96HY7 919 aaPredicted RBP18.89■□□□□ 0.61
CHKA-201ENST00000265689 KIF2AO00139 706 aaPredicted RBP18.89■□□□□ 0.61
CHKA-201ENST00000265689 YBX3P16989 372 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHKA-201ENST00000265689 CASP14P31944 242 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 USP11P51784 963 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 BTNL9Q6UXG8 535 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 FCHSD1Q86WN1 690 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 PANX2Q96RD6 677 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms