RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RNF207Q6ZRF8 634 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 MCF2L2Q86YR7 1114 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 LINC00301Q8NCQ3 95 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 GPRC5AQ8NFJ5 357 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 SYTL5Q8TDW5 730 aaPredicted RBP11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 PARK7Q99497 189 aaKnown RBP11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 A1CFQ9NQ94 594 aaKnown RBP11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 LMBRD1Q9NUN5 540 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 CFAP45Q9UL16 551 aa11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
SNRNP40-201ENST00000263694 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 TDP2O95551 362 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 VEGFBP49765 207 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 INHBEP58166 350 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 CNTN2Q02246 1040 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 SREBF2Q12772 1141 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 AP3B2Q13367 1082 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 TKFCQ3LXA3 575 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 NEK8Q86SG6 692 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 IL31RAQ8NI17 732 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 DOCK3Q8IZD9 2030 aa11.09□□□□□ -0.63
SNRNP40-201ENST00000263694 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.63
SNRNP40-201ENST00000263694 SPTLC2O15270 562 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 FOSP01100 380 aaPredicted RBP11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 PGK2P07205 417 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 GCLCP48506 637 aaPredicted RBP11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 ARHGAP4P98171 946 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 GHRHRQ02643 423 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 GRIN1Q05586 938 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 NOGQ13253 232 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 PTGDRQ13258 359 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 CRHR2Q13324 411 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 ATL3Q6DD88 541 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 C4orf32Q8N8J7 132 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 CRYGNQ8WXF5 182 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 GJA10Q969M2 543 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 TMEM60Q9H2L4 133 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
SNRNP40-201ENST00000263694 SLC37A4O43826 429 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 SLC25A27O95847 323 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 EIF2AK2P19525 551 aaKnown RBP11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 SREBF1P36956 1147 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 TRAPPC10P48553 1259 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 PCDHA7Q9UN72 937 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 ASTN1O14525 1302 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 FAM86B1E9PN63 330 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 GOLGA6L22H0YM25 854 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 YEATS4O95619 227 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 FAM86B2P0C5J1 330 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 BCRP11274 1271 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 ME1P48163 572 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 IL17AQ16552 155 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 SPECC1Q5M775 1068 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 GTF3C2Q8WUA4 911 aaPredicted RBP11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 RMDN3Q96TC7 470 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 MMP19Q99542 508 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 PXMP2Q9NR77 195 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 FBXO40Q9UH90 709 aa11.07□□□□□ -0.64
SNRNP40-201ENST00000263694 PLXNB2O15031 1838 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 RPTORQ8N122 1335 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 TLR2O60603 784 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 TBC1D8O95759 1140 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 ZNF76P36508 570 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 USP11P51784 963 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 PGM5Q15124 567 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 FAM110CQ1W6H9 321 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 AXDND1Q5T1B0 1012 aaPredicted RBP11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 ARHGEF16Q5VV41 709 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 C17orf99Q6UX52 265 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 CCAR1Q8IX12 1150 aaKnown RBP11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 MROH8Q9H579 483 aa11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 DDX25Q9UHL0 483 aaKnown RBP11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 FBXO2Q9UK22 296 aaPredicted RBP11.06□□□□□ -0.64
SNRNP40-201ENST00000263694 MCM3APO60318 1980 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 CA12O43570 354 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 NEMFO60524 1076 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 CYP3A4P08684 503 aa11.05□□□□□ -0.64
SNRNP40-201ENST00000263694 FCER1AP12319 257 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms