RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 PTGS1P23219 599 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 CLCN1P35523 988 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 FANCCQ00597 558 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 GRB10Q13322 594 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 MTMR2Q13614 643 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 MOXD1Q6UVY6 613 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 LDHDQ86WU2 507 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 WRNIP1Q96S55 665 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 NUDT12Q9BQG2 462 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 TPM3P06753 285 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 CT47A1Q5JQC4 288 aaPredicted RBP17.79■□□□□ 0.44
VPS26A-201ENST00000263559 FCHSD1Q86WN1 690 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 SCYL3Q8IZE3 742 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 PNMA5Q96PV4 448 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 MAGEF1Q9HAY2 307 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 NFE2L3Q9Y4A8 694 aa17.79■□□□□ 0.44
VPS26A-201ENST00000263559 YBX3P16989 372 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■□□□□ 8.7
VPS26A-201ENST00000263559 CCDC144BQ3MJ40 725 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
VPS26A-201ENST00000263559 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 KCNF1Q9H3M0 494 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 EMILIN3Q9NT22 766 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 RMND1Q9NWS8 449 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 MRPL11Q9Y3B7 192 aaKnown RBP17.78■□□□□ 0.44
VPS26A-201ENST00000263559 MYL1P05976 194 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 SPP2Q13103 211 aa17.78■□□□□ 0.44
VPS26A-201ENST00000263559 FAM86B1E9PN63 330 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 GCOM1H8Y6P7 765 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-201ENST00000263559 KLRC4O43908 158 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 FAM86B2P0C5J1 330 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 POLR2MP0CAP2 368 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 PRR16Q569H4 304 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 KRT79Q5XKE5 535 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 SNX29Q8TEQ0 813 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 AGBL1Q96MI9 1066 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 ZNF536O15090 1300 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 PTPRAP18433 802 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 Q4G0T1 1027 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-201ENST00000263559 LENG9Q96B70 501 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 BLOC1S4Q9NUP1 217 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 PPP2R3BQ9Y5P8 575 aa17.77■□□□□ 0.44
VPS26A-201ENST00000263559 ABCB11O95342 1321 aa17.77■□□□□ 0.43
VPS26A-201ENST00000263559 VCAM1P19320 739 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 STX17P56962 302 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 TEX2Q8IWB9 1127 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 CDK5RAP3Q96JB5 506 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 WDR18Q9BV38 432 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 SERPINC1P01008 464 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 ICAM1P05362 532 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 CYP3A4P08684 503 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 CIITAP33076 1130 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 DHX8Q14562 1220 aaKnown RBP17.76■□□□□ 0.43
VPS26A-201ENST00000263559 KMT5BQ4FZB7 885 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 ETNPPLQ8TBG4 499 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 KLRG1Q96E93 195 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 TRIM9Q9C026 710 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 PICK1Q9NRD5 415 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 SAMSN1Q9NSI8 373 aaKnown RBP17.76■□□□□ 0.43
VPS26A-201ENST00000263559 GDAQ9Y2T3 454 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 SSC5DA1L4H1 1573 aa17.76■□□□□ 0.43
VPS26A-201ENST00000263559 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
VPS26A-201ENST00000263559 ZNF18P17022 549 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 USP14P54578 494 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 BACE1P56817 501 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 KCNB1Q14721 858 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 ECM1Q16610 540 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 SLFN12Q8IYM2 578 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 C7orf25Q9BPX7 421 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 CCPG1Q9ULG6 757 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 FLOT1O75955 427 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 UBASH3AP57075 661 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 ZNF280CQ8ND82 737 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
VPS26A-201ENST00000263559 AS3MTQ9HBK9 375 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 PHIPQ8WWQ0 1821 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 SPATA1Q5VX52 437 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 SV2BQ7L1I2 683 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 FILIP1Q7Z7B0 1213 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
VPS26A-201ENST00000263559 ADARB2Q9NS39 739 aaKnown RBP17.75■□□□□ 0.43
VPS26A-201ENST00000263559 SYNRGQ9UMZ2 1314 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 ZHX2Q9Y6X8 837 aa17.75■□□□□ 0.43
VPS26A-201ENST00000263559 ZNF76P36508 570 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 AMPD3Q01432 767 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 MCM6Q14566 821 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 TMEM119Q4V9L6 283 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 DLK2Q6UY11 383 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
VPS26A-201ENST00000263559 SLC38A10Q9HBR0 1119 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 CTNND2Q9UQB3 1225 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms