RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 SLC1A4P43007 532 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 VAV2P52735 878 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 GRB10Q13322 594 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 KCTD16Q68DU8 428 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 ARL8AQ96BM9 186 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 GOLPH3Q9H4A6 298 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.54
ZNF541-201ENST00000263351 PURBQ96QR8 312 aaKnown RBP18.39■□□□□ 0.54
ZNF541-201ENST00000263351 TCP11L1Q9NUJ3 509 aa18.39■□□□□ 0.54
ZNF541-201ENST00000263351 CWC15Q9P013 229 aaKnown RBP18.39■□□□□ 0.54
ZNF541-201ENST00000263351 SNX12Q9UMY4 172 aa18.39■□□□□ 0.54
ZNF541-201ENST00000263351 SIK3Q9Y2K2 1263 aa18.39■□□□□ 0.54
ZNF541-201ENST00000263351 USP17L5A8MUK1 530 aa18.39■□□□□ 0.53
ZNF541-201ENST00000263351 IPO7O95373 1038 aaKnown RBP18.39■□□□□ 0.53
ZNF541-201ENST00000263351 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
ZNF541-201ENST00000263351 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
ZNF541-201ENST00000263351 PNMA5Q96PV4 448 aa18.39■□□□□ 0.53
ZNF541-201ENST00000263351 PALM3A6NDB9 673 aaPredicted RBP18.38■□□□□ 0.53
ZNF541-201ENST00000263351 AARSP49588 968 aaKnown RBP eCLIP18.38■□□□□ 0.53
ZNF541-201ENST00000263351 SBK1Q52WX2 424 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
ZNF541-201ENST00000263351 SPATA4Q8NEY3 305 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 DHTKD1Q96HY7 919 aaPredicted RBP18.38■□□□□ 0.53
ZNF541-201ENST00000263351 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 DEF6Q9H4E7 631 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 RBM12Q9NTZ6 932 aaKnown RBP18.38■□□□□ 0.53
ZNF541-201ENST00000263351 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 LAMB1P07942 1786 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 AKR1B10O60218 316 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 DGKHQ86XP1 1220 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 OSBPL9Q96SU4 736 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 MED4Q9NPJ6 270 aa18.38■□□□□ 0.53
ZNF541-201ENST00000263351 FAM153BP0C7A2 387 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 CCT5P48643 541 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 NAP1L1P55209 391 aaKnown RBP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 SPA17Q15506 151 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 UBE2SQ16763 222 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 FAM153CQ494X1 144 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 FAM153AQ9UHL3 310 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 ZNF652Q9Y2D9 606 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 SAMM50Q9Y512 469 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 NPHP3-ACAD11A0A0J9YXS1 232 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 GOLGA6BA6NDN3 693 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 FTCDO95954 541 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 LRRC47Q8N1G4 583 aaKnown RBP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 AENQ8WTP8 325 aaKnown RBP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 LDHBP07195 334 aaKnown RBP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 ATP1A2P50993 1020 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 NONOQ15233 471 aaKnown RBP eCLIP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 VWA3BQ502W6 1294 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 HAUS3Q68CZ6 603 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 NELFCDQ8IXH7 590 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
ZNF541-201ENST00000263351 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
ZNF541-201ENST00000263351 KRT14P02533 472 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
ZNF541-201ENST00000263351 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
ZNF541-201ENST00000263351 GOLGA6CA6NDK9 693 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 GOLGA6DP0CG33 693 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 TDRD12Q587J7 1177 aaKnown RBP18.36■□□□□ 0.53
ZNF541-201ENST00000263351 TTMPQ5BVD1 217 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 NLRP3Q96P20 1036 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 ERGIC2Q96RQ1 377 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 EYA3Q99504 573 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 C7orf25Q9BPX7 421 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 TLR10Q9BXR5 811 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 SH3GLB2Q9NR46 395 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 GOLGA6AQ9NYA3 693 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 PLAGL2Q9UPG8 496 aa18.36■□□□□ 0.53
ZNF541-201ENST00000263351 TLR2O60603 784 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 GLI1P08151 1106 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 TM4SF1P30408 202 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 BAP1Q92560 729 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 ROBO1Q9Y6N7 1651 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 MAGEA1P43355 309 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 CDK8P49336 464 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 CKAP4Q07065 602 aaKnown RBP18.35■□□□□ 0.53
ZNF541-201ENST00000263351 GOLGA6L1Q8N7Z2 621 aa18.35■□□□□ 0.53
ZNF541-201ENST00000263351 LAMB2P55268 1798 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 IVLP07476 585 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 CARSP49589 748 aaKnown RBP18.34■□□□□ 0.53
ZNF541-201ENST00000263351 GUCY2FP51841 1108 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 CENPPQ6IPU0 288 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 CCDC170Q8IYT3 715 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 GPCPD1Q9NPB8 672 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 SPATA31A1Q5TZJ5 1347 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
ZNF541-201ENST00000263351 IRAK1P51617 712 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 LRRC55Q6ZSA7 311 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 IFT81Q8WYA0 676 aa18.34■□□□□ 0.53
ZNF541-201ENST00000263351 DDX12PQ92771 950 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms