RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 UTP14CQ5TAP6 766 aaKnown RBP31.33■■■□□ 2.61
SMARCD3-201ENST00000262188 MYH7BA7E2Y1 1941 aa31.32■■■□□ 2.6
SMARCD3-201ENST00000262188 GHRHRQ02643 423 aa31.32■■■□□ 2.6
SMARCD3-201ENST00000262188 FIBPO43427 364 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 CCNA1P78396 465 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 AP3B2Q13367 1082 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 ZNF174Q15697 407 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 LETM2Q2VYF4 491 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 CCAR1Q8IX12 1150 aaKnown RBP31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 RNF186Q9NXI6 227 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 FBXO40Q9UH90 709 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 ATP6V1DQ9Y5K8 247 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 LCTP09848 1927 aa31.31■■■□□ 2.6
SMARCD3-201ENST00000262188 IL31RAQ8NI17 732 aa31.3■■■□□ 2.6
SMARCD3-201ENST00000262188 MMP19Q99542 508 aa31.3■■■□□ 2.6
SMARCD3-201ENST00000262188 MROH8Q9H579 483 aa31.3■■■□□ 2.6
SMARCD3-201ENST00000262188 MRVI1Q9Y6F6 885 aa31.3■■■□□ 2.6
SMARCD3-201ENST00000262188 SHCBP1Q8NEM2 672 aa31.3■■■□□ 2.6
SMARCD3-201ENST00000262188 ALDH1A1P00352 501 aa31.29■■■□□ 2.6
SMARCD3-201ENST00000262188 EIF2AK2P19525 551 aaKnown RBP31.29■■■□□ 2.6
SMARCD3-201ENST00000262188 TTC38Q5R3I4 469 aa31.29■■■□□ 2.6
SMARCD3-201ENST00000262188 ASTN1O14525 1302 aa31.29■■■□□ 2.6
SMARCD3-201ENST00000262188 MCM7P33993 719 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 SF3A1Q15459 793 aaKnown RBP31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 TPRNQ4KMQ1 711 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 RILPL1Q5EBL4 403 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 UIMC1Q96RL1 719 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 NOL7Q9UMY1 257 aaKnown RBP31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 TDP2O95551 362 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 ARHGAP4P98171 946 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 GPR142Q7Z601 462 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 NEK8Q86SG6 692 aa31.28■■■□□ 2.6
SMARCD3-201ENST00000262188 FOSP01100 380 aaPredicted RBP31.27■■■□□ 2.6
SMARCD3-201ENST00000262188 CTGFP29279 349 aa31.27■■■□□ 2.6
SMARCD3-201ENST00000262188 ZNF396Q96N95 335 aaPredicted RBP31.27■■■□□ 2.6
SMARCD3-201ENST00000262188 RMDN3Q96TC7 470 aa31.27■■■□□ 2.6
SMARCD3-201ENST00000262188 ZSWIM8A7E2V4 1837 aa31.27■■■□□ 2.6
SMARCD3-201ENST00000262188 THSD7BQ9C0I4 1608 aa31.27■■■□□ 2.6
SMARCD3-201ENST00000262188 CCNT1O60563 726 aaKnown RBP31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 FCER1AP12319 257 aa31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 SREBF1P36956 1147 aa31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 KCTD2Q14681 263 aa31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 ANO1Q5XXA6 986 aa31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 REM2Q8IYK8 340 aaPredicted RBP31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 CRYGNQ8WXF5 182 aa31.26■■■□□ 2.6
SMARCD3-201ENST00000262188 PLXNB2O15031 1838 aa31.26■■■□□ 2.59
SMARCD3-201ENST00000262188 COPB2P35606 906 aa31.26■■■□□ 2.59
SMARCD3-201ENST00000262188 KRT85P78386 507 aa31.26■■■□□ 2.59
SMARCD3-201ENST00000262188 ARHGAP39Q9C0H5 1083 aa31.26■■■□□ 2.59
SMARCD3-201ENST00000262188 PXMP2Q9NR77 195 aa31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 PFASO15067 1338 aa31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 RPTORQ8N122 1335 aa31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 POTEB2H3BUK9 544 aa31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 CAP1Q01518 475 aa31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 CYP2W1Q8TAV3 490 aa31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 MAP3K20Q9NYL2 800 aaKnown RBP31.25■■■□□ 2.59
SMARCD3-201ENST00000262188 ZNFX1Q9P2E3 1918 aaKnown RBP31.24■■■□□ 2.59
SMARCD3-201ENST00000262188 SOWAHBA6NEL2 793 aa31.24■■■□□ 2.59
SMARCD3-201ENST00000262188 ADORA2AP29274 412 aa31.24■■■□□ 2.59
SMARCD3-201ENST00000262188 ARHGEF16Q5VV41 709 aa31.24■■■□□ 2.59
SMARCD3-201ENST00000262188 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.24■■■□□ 2.59
SMARCD3-201ENST00000262188 TSKSQ9UJT2 592 aa31.24■■■□□ 2.59
SMARCD3-201ENST00000262188 DOCK3Q8IZD9 2030 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 SLC37A4O43826 429 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 PLEKHH3Q7Z736 793 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 FGD4Q96M96 766 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 RTEL1Q9NZ71 1219 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 COBLO75128 1261 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 MYCLP12524 364 aaPredicted RBP31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 PGM5Q15124 567 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 PTPAQ15257 358 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 FAM133AQ8N9E0 248 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 LEO1Q8WVC0 666 aaPredicted RBP31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 IVNS1ABPQ9Y6Y0 642 aa31.23■■■□□ 2.59
SMARCD3-201ENST00000262188 FAM86B1E9PN63 330 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 FAM86B2P0C5J1 330 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 MARCKSP29966 332 aaPredicted RBP31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 MAPK4P31152 587 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 TRAPPC10P48553 1259 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 CLEC17AQ6ZS10 378 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 GJA10Q969M2 543 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 PDCD2LQ9BRP1 358 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 TMEM60Q9H2L4 133 aa31.22■■■□□ 2.59
SMARCD3-201ENST00000262188 DNAJC25-GNG10A0A024R161 153 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 PTPREP23469 700 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 POTEDQ86YR6 584 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 SAMD3Q8N6K7 520 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 LINC00301Q8NCQ3 95 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 SPATA32Q96LK8 384 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 POLR3EQ9NVU0 708 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 NASPP49321 788 aaPredicted RBP31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 MCTP2Q6DN12 878 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 GBP4Q96PP9 640 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 CFAP45Q9UL16 551 aa31.21■■■□□ 2.59
SMARCD3-201ENST00000262188 MRPS9P82933 396 aaKnown RBP31.2■■■□□ 2.59
SMARCD3-201ENST00000262188 STK38Q15208 465 aa31.2■■■□□ 2.59
SMARCD3-201ENST00000262188 FRMPD4Q14CM0 1322 aa31.2■■■□□ 2.58
SMARCD3-201ENST00000262188 PTGDRQ13258 359 aa31.19■■■□□ 2.58
SMARCD3-201ENST00000262188 NSUN6Q8TEA1 469 aaKnown RBP31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms