RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 KIAA1024Q9UPX6 916 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 ZNF652Q9Y2D9 606 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 CEP83Q9Y592 693 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 REREQ9P2R6 1566 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 A0A087WUV0 522 aaPredicted RBP11.14□□□□□ -0.63
PALB2-201ENST00000261584 NPHP3-ACAD11A0A0J9YXS1 232 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 FOXP2O15409 715 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 ERFEQ4G0M1 354 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 TRIM68Q6AZZ1 485 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 OSBPL9Q96SU4 736 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 MROH5Q6ZUA9 1318 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 SORBS3O60504 671 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 ZNF18P17022 549 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 NR1D1P20393 614 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 CYP2J2P51589 502 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 PLTPP55058 493 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 MECOMQ03112 1051 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 CCDC170Q8IYT3 715 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 LIMA1Q9UHB6 759 aaKnown RBP11.14□□□□□ -0.63
PALB2-201ENST00000261584 PLAAQ9Y263 795 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 TBCAO75347 108 aaKnown RBP11.14□□□□□ -0.63
PALB2-201ENST00000261584 TRADDQ15628 312 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 TRIP13Q15645 432 aaPredicted RBP11.14□□□□□ -0.63
PALB2-201ENST00000261584 EP400NLQ6ZTU2 488 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 B4GALNT4Q76KP1 1039 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
PALB2-201ENST00000261584 STIM2Q9P246 746 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 ANKARQ7Z5J8 1434 aa11.14□□□□□ -0.63
PALB2-201ENST00000261584 ACTN1P12814 892 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 SCNN1DP51172 638 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 ZBED6P86452 979 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 SEPT7Q16181 437 aaKnown RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 SLC30A10Q6XR72 485 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 KCTD1Q719H9 257 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 EFCAB13Q8IY85 973 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 EYA3Q99504 573 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 SH2D3AQ9BRG2 576 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 TBK1Q9UHD2 729 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 CPDO75976 1380 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 UTYO14607 1347 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 ADAMTS3O15072 1205 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 MYBL1P10243 752 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 HIBCHQ6NVY1 386 aaPredicted RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 AGXT2Q9BYV1 514 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 GCNT3O95395 438 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 TUBBP07437 444 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 GNA11P29992 359 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 HERVK_113P62684 666 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 ADAM9Q13443 819 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 LRRC14Q15048 493 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 DDB1Q16531 1140 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 CCNI2Q6ZMN8 369 aaPredicted RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 CCDC50Q8IVM0 306 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 RETREG2Q8NC44 543 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 MYCBPQ99417 103 aaPredicted RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 SRP68Q9UHB9 627 aaKnown RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 TDP2O95551 362 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 CASP7P55210 303 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 HDLBPQ00341 1268 aaKnown RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 TBC1D1Q86TI0 1168 aaPredicted RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 MICAL1Q8TDZ2 1067 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 PYM1Q9BRP8 204 aaKnown RBP11.13□□□□□ -0.63
PALB2-201ENST00000261584 TSGA10Q9BZW7 698 aa11.13□□□□□ -0.63
PALB2-201ENST00000261584 GNPATO15228 680 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 PRPF3O43395 683 aaKnown RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 CDC25CP30307 473 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 MDM1Q8TC05 714 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 N4BP2L2Q92802 583 aaPredicted RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 ZIM3Q96PE6 472 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 PHF20L1A8MW92 1017 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 GFPT2O94808 682 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 SNX1Q13596 522 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 NEK8Q86SG6 692 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 MYOCDQ8IZQ8 938 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 ISCA1Q9BUE6 129 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 NUP58Q9BVL2 599 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 AMACRQ9UHK6 382 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 E9PMD0 336 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 CTNND1O60716 968 aaKnown RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 FAM153BP0C7A2 387 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 CCNE1P24864 410 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 CACNB3P54284 484 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 MTM1Q13496 603 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 FAM153CQ494X1 144 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 PRR16Q569H4 304 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 HP1BP3Q5SSJ5 553 aaPredicted RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 GLIS3Q8NEA6 775 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 STAG1Q8WVM7 1258 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms