RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 PTGDRQ13258 359 aa7.98□□□□□ -1.13
CSDE1-201ENST00000261443 MIS18BP1Q6P0N0 1132 aa7.98□□□□□ -1.13
CSDE1-201ENST00000261443 C2CD5Q86YS7 1000 aa7.98□□□□□ -1.13
CSDE1-201ENST00000261443 NUP133Q8WUM0 1156 aa7.98□□□□□ -1.13
CSDE1-201ENST00000261443 EEF2KMTQ96G04 330 aa7.98□□□□□ -1.13
CSDE1-201ENST00000261443 PYM1Q9BRP8 204 aaKnown RBP7.98□□□□□ -1.13
CSDE1-201ENST00000261443 ZKSCAN3Q9BRR0 538 aa7.98□□□□□ -1.13
CSDE1-201ENST00000261443 WNT7AO00755 349 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 PSMA7O14818 248 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 BUB1O43683 1085 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 SMNDC1O75940 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 KRT2P35908 639 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 EIF4A3P38919 411 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 KLHDC7AQ5VTJ3 777 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 LRP10Q7Z4F1 713 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ANKS4BQ8N8V4 417 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.97□□□□□ -1.137e-7■□□□□ 9.9
CSDE1-201ENST00000261443 NOP53Q9NZM5 478 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ARHGAP20Q9P2F6 1191 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 CNOT8Q9UFF9 292 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 TSKSQ9UJT2 592 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 NOVA2Q9UNW9 492 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 H7C1W4 665 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ORC4O43929 436 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 CIAO1O76071 339 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 PECAM1P16284 738 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 DRD4P21917 467 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 MAGEA1P43355 309 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 MTIF2P46199 727 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ZNF844Q08AG5 666 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 RIPK1Q13546 671 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 WTAPQ15007 396 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 RRP12Q5JTH9 1297 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 TBC1D1Q86TI0 1168 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 CSGALNACT2Q8N6G5 542 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 CCDC197Q8NCU1 140 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ZNF570Q96NI8 536 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 NOX5Q96PH1 765 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 YIPF3Q9GZM5 350 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 SWAP70Q9UH65 585 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 SALL4Q9UJQ4 1053 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 A0A1W2PQJ5 194 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 MPHOSPH10O00566 681 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 DIAPH2O60879 1101 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 PAEPP09466 180 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ADD2P35612 726 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 RNASE9P60153 205 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 TTC38Q5R3I4 469 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 TMED8Q6PL24 325 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 GPIHBP1Q8IV16 184 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 LRRC45Q96CN5 670 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 ACSBG1Q96GR2 724 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 NOC4LQ9BVI4 516 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 CORO1CQ9ULV4 474 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 SOS2Q07890 1332 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 XIRP1Q702N8 1843 aaKnown RBP7.97□□□□□ -1.13
CSDE1-201ENST00000261443 MYH7P12883 1935 aa7.97□□□□□ -1.13
CSDE1-201ENST00000261443 MEGF6O75095 1541 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 ERICH2A1L162 156 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 H0YGN5 161 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 RAD51CO43502 376 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 MAGOHP61326 146 aaKnown RBP7.96□□□□□ -1.13
CSDE1-201ENST00000261443 RASSF7Q02833 373 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 SEMA3FQ13275 785 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 THEMIS2Q5TEJ8 643 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 KLHL7Q8IXQ5 586 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 FANCBQ8NB91 859 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 AGAP11Q8TF27 550 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 UBLCP1Q8WVY7 318 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-201ENST00000261443 MAGOHBQ96A72 148 aaKnown RBP7.96□□□□□ -1.13
CSDE1-201ENST00000261443 MTMR8Q96EF0 704 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 CHMP6Q96FZ7 201 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 L3MBTL3Q96JM7 780 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-201ENST00000261443 PLAGL2Q9UPG8 496 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 NFS1Q9Y697 457 aa7.96□□□□□ -1.13
CSDE1-201ENST00000261443 PKD1L3Q7Z443 1732 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 F8W031 263 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 IDH1O75874 414 aaKnown RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 GSTA1P08263 222 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 STAT6P42226 847 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 TNNC1P63316 161 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 ATP2C1P98194 919 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 SF3A3Q12874 501 aaKnown RBP eCLIP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 TRAF1Q13077 416 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 UAP1Q16222 522 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 FIGNQ5HY92 759 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 AGBL2Q5U5Z8 902 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 PLBD2Q8NHP8 589 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.96□□□□□ -1.141e-7■■■■□ 24.2
CSDE1-201ENST00000261443 ZNF496Q96IT1 587 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 CNOT6LQ96LI5 555 aaKnown RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 CNNM2Q9H8M5 875 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 PANK4Q9NVE7 773 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 BSDC1Q9NW68 430 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-201ENST00000261443 MYH6P13533 1939 aa7.96□□□□□ -1.14
CSDE1-201ENST00000261443 CFAP73A6NFT4 308 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 LCA5LO95447 670 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 GCP02774 474 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 SNX1Q13596 522 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms