RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 MYSM1Q5VVJ2 828 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 ERO1BQ86YB8 467 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 SRRTQ9BXP5 876 aaKnown RBP21.29■■□□□ 1
COL4A3BP-201ENST00000261415 CXorf56Q9H5V9 222 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 SPDYE5A6NIY4 337 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 SNAP25P60880 206 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 SATB1Q01826 763 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 PPATQ06203 517 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 RBM46Q8TBY0 533 aaKnown RBP21.29■■□□□ 1
COL4A3BP-201ENST00000261415 KIFC2Q96AC6 838 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 OTUD5Q96G74 571 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 TANGO6Q9C0B7 1094 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 ZMYND12Q9H0C1 365 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 RPAP3Q9H6T3 665 aaPredicted RBP21.29■■□□□ 1
COL4A3BP-201ENST00000261415 MED4Q9NPJ6 270 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 PCDHA4Q9UN74 947 aa21.29■■□□□ 1
COL4A3BP-201ENST00000261415 RBBP6Q7Z6E9 1792 aaKnown RBP21.28■■□□□ 1
COL4A3BP-201ENST00000261415 SNW1Q13573 536 aaKnown RBP21.28■■□□□ 1
COL4A3BP-201ENST00000261415 GALNT17Q6IS24 598 aa21.28■■□□□ 1
COL4A3BP-201ENST00000261415 CEP89Q96ST8 783 aa21.28■■□□□ 1
COL4A3BP-201ENST00000261415 TFIP11Q9UBB9 837 aaKnown RBP21.28■■□□□ 1
COL4A3BP-201ENST00000261415 ADAMTS3O15072 1205 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 CHADLQ6NUI6 762 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 PPP1R18Q6NYC8 613 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 REXO1L1PQ8IX06 675 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 BLIDQ8IZY5 108 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 DAGLBQ8NCG7 672 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 TNFRSF25Q93038 417 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 TNMDQ9H2S6 317 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 MYH7BA7E2Y1 1941 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 ESYT2A0FGR8 921 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 SH3D19Q5HYK7 790 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 ZNF396Q96N95 335 aaPredicted RBP21.27■■□□□ 1
COL4A3BP-201ENST00000261415 SLF1Q9BQI6 1058 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 RANBP17Q9H2T7 1088 aaKnown RBP21.27■■□□□ 1
COL4A3BP-201ENST00000261415 TMOD4Q9NZQ9 345 aa21.27■■□□□ 1
COL4A3BP-201ENST00000261415 SMCO2A6NFE2 343 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 IRF6O14896 467 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 ZNF165P49910 485 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 MCTP2Q6DN12 878 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 SAMD1Q6SPF0 538 aaPredicted RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 RPAINQ86UA6 219 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 USP28Q96RU2 1077 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 AMNQ9BXJ7 453 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 GBA2Q9HCG7 927 aaPredicted RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 C6orf50Q9HD87 102 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 CFAP45Q9UL16 551 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 RPS6KA5O75582 802 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 CELF2O95319 508 aaKnown RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 ITGBL1O95965 494 aaPredicted RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 FKBP1BP68106 108 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 ATL3Q6DD88 541 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 RBM43Q6ZSC3 357 aaKnown RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 PRPF38AQ8NAV1 312 aaKnown RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 OPTNQ96CV9 577 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 FTOQ9C0B1 505 aaKnown RBP eCLIP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 TRMT1Q9NXH9 659 aaKnown RBP21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 ADAM21Q9UKJ8 722 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 PCDHA1Q9Y5I3 950 aa21.26■□□□□ 0.99
COL4A3BP-201ENST00000261415 UNCXA6NJT0 531 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 M0R2N6 131 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 FLOT1O75955 427 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 GNA11P29992 359 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 LMAN1P49257 510 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 FBXO11Q86XK2 927 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 DDX19AQ9NUU7 478 aaKnown RBP21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 GSDMDP57764 484 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 CCZ1BP86790 482 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 CCZ1P86791 482 aaPredicted RBP21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 PPIL2Q13356 520 aa21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 EARS2Q5JPH6 523 aaKnown RBP21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 SCAND2PQ9GZW5 306 aaPredicted RBP21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 GPBP1L1Q9HC44 474 aaPredicted RBP21.25■□□□□ 0.99
COL4A3BP-201ENST00000261415 FAM205CA6NFA0 338 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 CEBPZQ03701 1054 aaKnown RBP21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 USH1GQ495M9 461 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 PPP1R9AQ9ULJ8 1098 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 A0A0G2JMZ2 1700 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 ADCY7P51828 1080 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 CCDC174Q6PII3 467 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 C2orf69Q8N8R5 385 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 RASGRP4Q8TDF6 673 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 PCDHA6Q9UN73 950 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 KCNH4Q9UQ05 1017 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 PCDHA8Q9Y5H6 950 aa21.24■□□□□ 0.99
COL4A3BP-201ENST00000261415 A0A0G2JLL6 359 aaPredicted RBP21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 EIF3CLB5ME19 914 aaKnown RBP21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 GOLGA6L19H0YKK7 550 aa21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 CPP00450 1065 aa21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 MMS22LQ6ZRQ5 1243 aa21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 PRRT2Q7Z6L0 340 aaPredicted RBP21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 SPATA32Q96LK8 384 aa21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 EIF3CQ99613 913 aaKnown RBP21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 ZCCHC17Q9NP64 241 aaKnown RBP21.23■□□□□ 0.99
COL4A3BP-201ENST00000261415 EFCAB8A8MWE9 144 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 CXCL11O14625 94 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 TBC1D8O95759 1140 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 DHX8Q14562 1220 aaKnown RBP21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 RILPL1Q5EBL4 403 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 BICD2Q8TD16 824 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms