RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 PORCNQ9H237 461 aa17.78■□□□□ 0.44
GYPC-201ENST00000259254 CFAP45Q9UL16 551 aa17.78■□□□□ 0.44
GYPC-201ENST00000259254 PFASO15067 1338 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 MYH6P13533 1939 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 FIBPO43427 364 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 ECM2O94769 699 aaPredicted RBP17.77■□□□□ 0.44
GYPC-201ENST00000259254 BCRP11274 1271 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 FCER1AP12319 257 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 TRAPPC10P48553 1259 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 SOX10P56693 466 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 CAP1Q01518 475 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 GHRHRQ02643 423 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 MLLT1Q03111 559 aaPredicted RBP17.77■□□□□ 0.44
GYPC-201ENST00000259254 NBR1Q14596 966 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 LETM2Q2VYF4 491 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 NEK8Q86SG6 692 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 USP28Q96RU2 1077 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 MAF1Q9H063 256 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 CYP39A1Q9NYL5 469 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 IVNS1ABPQ9Y6Y0 642 aa17.77■□□□□ 0.44
GYPC-201ENST00000259254 RBBP6Q7Z6E9 1792 aaKnown RBP17.76■□□□□ 0.43
GYPC-201ENST00000259254 POTEB2H3BUK9 544 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 MAPK4P31152 587 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 TOB1P50616 345 aaPredicted RBP17.76■□□□□ 0.43
GYPC-201ENST00000259254 UBXN2AP68543 259 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 ATL3Q6DD88 541 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 C17orf99Q6UX52 265 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 TAAR1Q96RJ0 339 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 FTOQ9C0B1 505 aaKnown RBP eCLIP17.76■□□□□ 0.43
GYPC-201ENST00000259254 COL20A1Q9P218 1284 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 PTPN22Q9Y2R2 807 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 PARP14Q460N5 1801 aa17.76■□□□□ 0.43
GYPC-201ENST00000259254 ARHGAP4P98171 946 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 STK38Q15208 465 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 SF3A1Q15459 793 aaKnown RBP17.75■□□□□ 0.43
GYPC-201ENST00000259254 ZNF174Q15697 407 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 ARHGEF16Q5VV41 709 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 ANO1Q5XXA6 986 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 PURBQ96QR8 312 aaKnown RBP17.75■□□□□ 0.43
GYPC-201ENST00000259254 RMDN3Q96TC7 470 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 PCDHB6Q9Y5E3 794 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 CLIC4Q9Y696 253 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 MGAMO43451 1857 aa17.75■□□□□ 0.43
GYPC-201ENST00000259254 GOLGA6L22H0YM25 854 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 CCNT1O60563 726 aaKnown RBP17.74■□□□□ 0.43
GYPC-201ENST00000259254 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
GYPC-201ENST00000259254 MCM7P33993 719 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 ZNF76P36508 570 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 SREBF1P36956 1147 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 GPR142Q7Z601 462 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 PLEKHH3Q7Z736 793 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 SPATA32Q96LK8 384 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
GYPC-201ENST00000259254 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
GYPC-201ENST00000259254 PGK2P07205 417 aa17.73■□□□□ 0.43
GYPC-201ENST00000259254 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
GYPC-201ENST00000259254 NSUN6Q8TEA1 469 aaKnown RBP17.73■□□□□ 0.43
GYPC-201ENST00000259254 SCAND2PQ9GZW5 306 aaPredicted RBP17.73■□□□□ 0.43
GYPC-201ENST00000259254 PXMP2Q9NR77 195 aa17.73■□□□□ 0.43
GYPC-201ENST00000259254 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
GYPC-201ENST00000259254 RTEL1Q9NZ71 1219 aa17.73■□□□□ 0.43
GYPC-201ENST00000259254 WNT7AO00755 349 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 TDP2O95551 362 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 YEATS4O95619 227 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 BMP15O95972 392 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 MYCLP12524 364 aaPredicted RBP17.72■□□□□ 0.43
GYPC-201ENST00000259254 USP11P51784 963 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
GYPC-201ENST00000259254 CNTN2Q02246 1040 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 CLEC17AQ6ZS10 378 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
GYPC-201ENST00000259254 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.72■□□□□ 0.43
GYPC-201ENST00000259254 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
GYPC-201ENST00000259254 RPTORQ8N122 1335 aa17.72■□□□□ 0.43
GYPC-201ENST00000259254 HTTP42858 3142 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 COL11A1P12107 1806 aaPredicted RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 STRNO43815 780 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 PTPREP23469 700 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 ADORA2AP29274 412 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 NASPP49321 788 aaPredicted RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 KIF22Q14807 665 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 TPRNQ4KMQ1 711 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 LEO1Q8WVC0 666 aaPredicted RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 MPHOSPH6Q99547 160 aaKnown RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
GYPC-201ENST00000259254 DDX25Q9UHL0 483 aaKnown RBP17.71■□□□□ 0.43
GYPC-201ENST00000259254 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 SPTLC2O15270 562 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 MARCH6O60337 910 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 NEMFO60524 1076 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 CYP3A4P08684 503 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 CCND2P30279 289 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 ORC2Q13416 577 aaPredicted RBP17.7■□□□□ 0.42
GYPC-201ENST00000259254 PGM5Q15124 567 aa17.7■□□□□ 0.42
GYPC-201ENST00000259254 DPP9Q86TI2 863 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms