RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SLC8A1P32418 973 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 FAM133AQ8N9E0 248 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 CYFIP2Q96F07 1278 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 ZSCAN10Q96SZ4 725 aaPredicted RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 LIMA1Q9UHB6 759 aaKnown RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 CALML3P27482 149 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 TNNI2P48788 182 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 PLTPP55058 493 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 TRADDQ15628 312 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 CCDC6Q16204 474 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 CYB5D1Q6P9G0 228 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 CCDC50Q8IVM0 306 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 CCDC197Q8NCU1 140 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 ZKSCAN4Q969J2 545 aaPredicted RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 SMIM22K7EJ46 135 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 DYNLL1P63167 89 aaKnown RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 UBE3CQ15386 1083 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 NTRK3Q16288 839 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 NDST4Q9H3R1 872 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 REXO2Q9Y3B8 237 aaKnown RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 XDHP47989 1333 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 AGPSO00116 658 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 OPLAHO14841 1288 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 RGS16O15492 202 aaPredicted RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 SCG2P13521 617 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 PTGISQ16647 500 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 AP1ARQ63HQ0 302 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
USP30-201ENST00000257548 L3MBTL1Q9Y468 752 aa13.56□□□□□ -0.24
USP30-201ENST00000257548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP30-201ENST00000257548 ANO9A1A5B4 782 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 PDE8BO95263 885 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 PLCG1P19174 1290 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 SARSP49591 514 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 LRRC14Q15048 493 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 CCDC38Q502W7 563 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 CAVIN4Q5BKX8 364 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 ANKRD40Q6AI12 368 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 BLIDQ8IZY5 108 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 SPATS2LQ9NUQ6 558 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 INTS9Q9NV88 658 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 SEMA3EO15041 775 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 ARID4AP29374 1257 aaPredicted RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 VPS41P49754 854 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 CNNM4Q6P4Q7 775 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 KLHL29Q96CT2 875 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 DNAJC17Q9NVM6 304 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 GYG1P46976 350 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.24
USP30-201ENST00000257548 RASGRF1Q13972 1273 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 PUM3Q15397 648 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 SEPT7Q16181 437 aaKnown RBP13.55□□□□□ -0.24
USP30-201ENST00000257548 KIF2BQ8N4N8 673 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 CCDC26Q8TAB7 109 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
USP30-201ENST00000257548 H0Y3Z8 333 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 WNT7AO00755 349 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 DAPK3O43293 454 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 AMPD2Q01433 879 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 STK4Q13043 487 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 DZIP1Q86YF9 867 aaKnown RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 DISC1Q9NRI5 854 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 FBXL5Q9UKA1 691 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 HMGB1P1B2RPK0 211 aaPredicted RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 ASIC2Q16515 512 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 VSIG1Q86XK7 387 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 SWAP70Q9UH65 585 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 A0A1W2PRG0 241 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 PAPD7Q5XG87 772 aaKnown RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms