RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 MSCO60682 206 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 PDXDC2PQ6P474 469 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM83AQ86UY5 434 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 NEDD1Q8NHV4 660 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 RRN3P2A6NIE6 340 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 TUBBP07437 444 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 AP3M2P53677 418 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 ASIC2Q16515 512 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 SH3RF3Q8TEJ3 882 aaPredicted RBP14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 LUC7L2Q9Y383 392 aaKnown RBP14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 ZC3H4Q9UPT8 1303 aaKnown RBP14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 MAGEB2O15479 319 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 SPP2Q13103 211 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 DENND3A2RUS2 1198 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 STAG3L1P0CL83 205 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 ITPK1Q13572 414 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 UBL4BQ8N7F7 174 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 SPC24Q8NBT2 197 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 CCDC114Q96M63 670 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 PARP2Q9UGN5 583 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 ADGRB1O14514 1584 aa14.8□□□□□ -0.04
PRPF38A-201ENST00000257181 DYNLL1P63167 89 aaKnown RBP14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 MYL5Q02045 173 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 KIF18AQ8NI77 898 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM84BQ96KN1 310 aaPredicted RBP14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 ATP6V0A4Q9HBG4 840 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 UBXN1Q04323 297 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 TADA2BQ86TJ2 420 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 GSDMBQ8TAX9 411 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 KMT5AQ9NQR1 393 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 PPME1Q9Y570 386 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 TRAPPC3O43617 180 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 RXRAP19793 462 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 BFSP2Q13515 415 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 SRGAP1Q7Z6B7 1085 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 PDCL2Q8N4E4 241 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 ZNF569Q5MCW4 686 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 OTUD6BQ8N6M0 293 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 RPAP3Q9H6T3 665 aaPredicted RBP14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 TXNDC16Q9P2K2 825 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 HADHQ16836 314 aaKnown RBP14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 CEP170P1Q96L14 293 aa14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 STRBPQ96SI9 672 aaKnown RBP14.79□□□□□ -0.04
PRPF38A-201ENST00000257181 DCDC2CA8MYV0 355 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 PRMT2P55345 433 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 PTPN14Q15678 1187 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 ARL6IP4Q66PJ3 421 aaKnown RBP14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 ZBTB33Q86T24 672 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 BCL9O00512 1426 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 IFNAR1P17181 557 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 KRT9P35527 623 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 MAP2K1Q02750 393 aaPredicted RBP14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 IFFO1Q0D2I5 559 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 TDRD7Q8NHU6 1098 aaKnown RBP14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 RMDN3Q96TC7 470 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM204AQ9H8W3 233 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 RIC8AQ9NPQ8 531 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 TSKSQ9UJT2 592 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 ASAP2O43150 1006 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 GTPBP6O43824 516 aaPredicted RBP14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 DIXDC1Q155Q3 683 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 TMC6Q7Z403 805 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 CSGALNACT2Q8N6G5 542 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 RDM1Q8NG50 284 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 CRACR2AQ9BSW2 395 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 HTATIP2Q9BUP3 242 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 MAF1Q9H063 256 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 GRPEL1Q9HAV7 217 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM169AQ9Y6X4 670 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 IGKV5-2P06315 115 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 IGBP1P78318 339 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 SFSWAPQ12872 951 aaKnown RBP14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 GRM4Q14833 912 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM83BQ5T0W9 1011 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 CALR3Q96L12 384 aaKnown RBP14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 DAAM1Q9Y4D1 1078 aa14.78□□□□□ -0.04
PRPF38A-201ENST00000257181 EIF3CLB5ME19 914 aaKnown RBP14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 SH2B2O14492 632 aaPredicted RBP14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 TFRCP02786 760 aaKnown RBP14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 SRGNP10124 158 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 MKRN3Q13064 507 aaKnown RBP14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 IER5Q5VY09 327 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 TAOK1Q7L7X3 1001 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 EIF3CQ99613 913 aaKnown RBP14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 ANO3Q9BYT9 981 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 SYCE3A1L190 88 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 DPYSL4O14531 572 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 KCTD1Q719H9 257 aa14.77□□□□□ -0.04
PRPF38A-201ENST00000257181 CROCCP2Q86T23 111 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms