RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KIF11P52732 1056 aa15□□□□□ -0.01
VHL-201ENST00000256474 KRT79Q5XKE5 535 aa15□□□□□ -0.01
VHL-201ENST00000256474 FAM114A1Q8IWE2 563 aa15□□□□□ -0.01
VHL-201ENST00000256474 NDST4Q9H3R1 872 aa15□□□□□ -0.01
VHL-201ENST00000256474 SEMA6BQ9H3T3 888 aa15□□□□□ -0.01
VHL-201ENST00000256474 GOLPH3Q9H4A6 298 aa15□□□□□ -0.01
VHL-201ENST00000256474 DMGDHQ9UI17 866 aaKnown RBP15□□□□□ -0.01
VHL-201ENST00000256474 SRGNP10124 158 aa15□□□□□ -0.01
VHL-201ENST00000256474 ATP1A2P50993 1020 aa15□□□□□ -0.01
VHL-201ENST00000256474 GTF2IP78347 998 aa15□□□□□ -0.01
VHL-201ENST00000256474 ZBED6P86452 979 aa15□□□□□ -0.01
VHL-201ENST00000256474 TTBK2Q6IQ55 1244 aa15□□□□□ -0.01
VHL-201ENST00000256474 CNNM4Q6P4Q7 775 aa15□□□□□ -0.01
VHL-201ENST00000256474 KRT25Q7Z3Z0 450 aa15□□□□□ -0.01
VHL-201ENST00000256474 ZSCAN29Q8IWY8 852 aaPredicted RBP15□□□□□ -0.01
VHL-201ENST00000256474 KIAA0895Q8NCT3 520 aa15□□□□□ -0.01
VHL-201ENST00000256474 MSANTD4Q8NCY6 345 aa15□□□□□ -0.01
VHL-201ENST00000256474 RRP15Q9Y3B9 282 aaKnown RBP15□□□□□ -0.01
VHL-201ENST00000256474 ZEB2O60315 1214 aa15□□□□□ -0.01
VHL-201ENST00000256474 RHOBTB3O94955 611 aa15□□□□□ -0.01
VHL-201ENST00000256474 TRAPPC11Q7Z392 1133 aa15□□□□□ -0.01
VHL-201ENST00000256474 WDR66Q8TBY9 1149 aa15□□□□□ -0.01
VHL-201ENST00000256474 SELENOOQ9BVL4 669 aa15□□□□□ -0.01
VHL-201ENST00000256474 NYXQ9GZU5 481 aa15□□□□□ -0.01
VHL-201ENST00000256474 POLR2FP61218 127 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 CKAP4Q07065 602 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 TCP10Q12799 353 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 ARHGEF1Q92888 912 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 KBTBD4Q9NVX7 518 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 COL4A1P02462 1669 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 STRCP1A6NGW2 1772 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 PDS5AQ29RF7 1337 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 GOLGA6BA6NDN3 693 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 PAFAH1B1P43034 410 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 NOP2P46087 812 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 CACNB3P54284 484 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 AMPD2Q01433 879 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 ZNF804AQ7Z570 1209 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 GOLGA5Q8TBA6 731 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 LARP4BQ92615 738 aaKnown RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 SPATA31A1Q5TZJ5 1347 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 MEIS1O00470 390 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 TAL1P17542 331 aaPredicted RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 KCNK18Q7Z418 384 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 KLHL7Q8IXQ5 586 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 DDX12PQ92771 950 aa14.99□□□□□ -0.01
VHL-201ENST00000256474 DHTKD1Q96HY7 919 aaPredicted RBP14.99□□□□□ -0.01
VHL-201ENST00000256474 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 ZSCAN5CA6NGD5 496 aaPredicted RBP14.98□□□□□ -0.01
VHL-201ENST00000256474 ZNF263O14978 683 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 LDHCP07864 332 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 RBM5P52756 815 aaKnown RBP eCLIP14.98□□□□□ -0.01
VHL-201ENST00000256474 CLEC4GQ6UXB4 293 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 ZNF507Q8TCN5 953 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 RAB21Q9UL25 225 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 HERC4Q5GLZ8 1057 aaPredicted RBP14.98□□□□□ -0.01
VHL-201ENST00000256474 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
VHL-201ENST00000256474 ALS2CR12Q96Q35 445 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 DNAJC7Q99615 494 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 TMEM51Q9NW97 253 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 ARHGAP20Q9P2F6 1191 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 MYO1AQ9UBC5 1043 aa14.98□□□□□ -0.01
VHL-201ENST00000256474 GOLGA6CA6NDK9 693 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 GOLGA6DP0CG33 693 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 SLC1A4P43007 532 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 HLTFQ14527 1009 aaKnown RBP eCLIP14.97□□□□□ -0.01
VHL-201ENST00000256474 FAM71BQ8TC56 605 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 GOLGA6AQ9NYA3 693 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 NID2Q14112 1375 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 NUP98P52948 1817 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L15C9J2P7 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 E9PMD0 336 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 VWA3BQ502W6 1294 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 TMED8Q6PL24 325 aaPredicted RBP14.97□□□□□ -0.01
VHL-201ENST00000256474 USP17L6PQ6QN14 398 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 LSM14BQ9BX40 385 aaKnown RBP14.97□□□□□ -0.01
VHL-201ENST00000256474 CCSER1Q9C0I3 900 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 RASSF4Q9H2L5 321 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.97□□□□□ -0.01
VHL-201ENST00000256474 SAMM50Q9Y512 469 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 ADCY7P51828 1080 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 VAV2P52735 878 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 DCAF17Q5H9S7 520 aaPredicted RBP14.97□□□□□ -0.01
VHL-201ENST00000256474 SLC30A10Q6XR72 485 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 TSG101Q99816 390 aa14.97□□□□□ -0.01
VHL-201ENST00000256474 ZNF287Q9HBT7 754 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms