RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CCDC181Q5TID7 509 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 CTAGE6Q86UF2 777 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 CTAGE4Q8IX94 777 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 HPS3Q969F9 1004 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 KIFC2Q96AC6 838 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 NAPGQ99747 312 aaPredicted RBP17.5■□□□□ 0.39
RFX1-201ENST00000254325 ANO3Q9BYT9 981 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 RIC8AQ9NPQ8 531 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 JADE2Q9NQC1 790 aa17.5■□□□□ 0.39
RFX1-201ENST00000254325 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
RFX1-201ENST00000254325 LIMA1Q9UHB6 759 aaKnown RBP17.5■□□□□ 0.39
RFX1-201ENST00000254325 FAM26FQ5R3K3 315 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 PPP1R18Q6NYC8 613 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 MB21D1Q8N884 522 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
RFX1-201ENST00000254325 DNM3Q9UQ16 869 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 ESYT2A0FGR8 921 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 ORC2Q13416 577 aaPredicted RBP17.49■□□□□ 0.39
RFX1-201ENST00000254325 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 DRC1Q96MC2 740 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 INTS13Q9NVM9 706 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 F5H6K3 240 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 KLRC3Q07444 240 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 ROBO3Q96MS0 1386 aa17.49■□□□□ 0.39
RFX1-201ENST00000254325 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
RFX1-201ENST00000254325 ARID5AQ03989 594 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 TNIP1Q15025 636 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 DCAF4Q8WV16 495 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 HSD3B7Q9H2F3 369 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 KCNQ5Q9NR82 932 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 LGALS16A8MUM7 142 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 CTIFO43310 598 aaKnown RBP17.48■□□□□ 0.39
RFX1-201ENST00000254325 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
RFX1-201ENST00000254325 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
RFX1-201ENST00000254325 PDE4CQ08493 712 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 SYDE2Q5VT97 1194 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 SLFN12Q8IYM2 578 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 ZNF710Q8N1W2 664 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 ABHD10Q9NUJ1 306 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 OGFRQ9NZT2 677 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 DDX60Q8IY21 1712 aaKnown RBP17.48■□□□□ 0.39
RFX1-201ENST00000254325 MACROD2A1Z1Q3 448 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 DDX12PQ92771 950 aa17.48■□□□□ 0.39
RFX1-201ENST00000254325 STK4Q13043 487 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 CDKAL1Q5VV42 579 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 SPATA20Q8TB22 786 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 JDP2Q8WYK2 163 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 ARFGAP3Q9NP61 516 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 MYH13Q9UKX3 1938 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 SHMT1P34896 483 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 DNA2P51530 1060 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 CYP4A11Q02928 519 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 HSP90B2PQ58FF3 399 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 UNC13DQ70J99 1090 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 JAKMIP2Q96AA8 810 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 ADGRG1Q9Y653 693 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 SLURP2P0DP57 97 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
RFX1-201ENST00000254325 GJA10Q969M2 543 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 SH2D4AQ9H788 454 aa17.47■□□□□ 0.39
RFX1-201ENST00000254325 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 SLC37A4O43826 429 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 TNNT3P45378 269 aaPredicted RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 GIMAP8Q8ND71 665 aaPredicted RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 PKD2L1Q9P0L9 805 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 FAM13AO94988 1023 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 SLC35F6Q8N357 371 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 RAD54LQ92698 747 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 CAPZA3Q96KX2 299 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 KBTBD4Q9NVX7 518 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 RHOXF2BP0C7M4 288 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 ANKRD40Q6AI12 368 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 APOBEC3HQ6NTF7 200 aaKnown RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 SPAG5Q96R06 1193 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 WDR24Q96S15 920 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 RHOXF2Q9BQY4 288 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 ACBD3Q9H3P7 528 aa17.46■□□□□ 0.39
RFX1-201ENST00000254325 MORC2Q9Y6X9 1032 aaPredicted RBP17.46■□□□□ 0.39
RFX1-201ENST00000254325 C4AP0C0L4 1744 aa17.46■□□□□ 0.38
RFX1-201ENST00000254325 C4BP0C0L5 1744 aa17.46■□□□□ 0.38
RFX1-201ENST00000254325 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.38
RFX1-201ENST00000254325 CETN3O15182 167 aa17.46■□□□□ 0.38
RFX1-201ENST00000254325 RRAGAQ7L523 313 aa17.46■□□□□ 0.38
RFX1-201ENST00000254325 REXO1L1PQ8IX06 675 aa17.46■□□□□ 0.38
RFX1-201ENST00000254325 CHD4Q14839 1912 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 TIAM2Q8IVF5 1701 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 GYPCP04921 128 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.38
RFX1-201ENST00000254325 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms