RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 ESYT2A0FGR8 921 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 RIOK3O14730 519 aaKnown RBP12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 RRP9O43818 475 aaKnown RBP12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 UBA7P41226 1012 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 SLC1A4P43007 532 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 HSP90AA4PQ58FG1 418 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 PIGSQ96S52 555 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
CLUHP3-201ENST00000254109 USP17L10C9JJH3 530 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 TMEM232C9JQI7 657 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 CCNT1O60563 726 aaKnown RBP12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 CASP1P29466 404 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 SLC16A2P36021 539 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 ZNF543Q08ER8 600 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 SMC1BQ8NDV3 1235 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 STAMQ92783 540 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 AK8Q96MA6 479 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 BLZF1Q9H2G9 400 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 AS3MTQ9HBK9 375 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 GOPCQ9HD26 462 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 DISC1Q9NRI5 854 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 PASKQ96RG2 1323 aa12.83□□□□□ -0.35
CLUHP3-201ENST00000254109 USP27XA6NNY8 438 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 PPP1R3GB7ZBB8 358 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 BACE1P56817 501 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 CUL4BQ13620 913 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 KARSQ15046 597 aaKnown RBP12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 LETM2Q2VYF4 491 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 FILIP1LQ4L180 1135 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 MTERF4Q7Z6M4 381 aaKnown RBP12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 NEK8Q86SG6 692 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 REXO1Q8N1G1 1221 aaKnown RBP12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 ZNF592Q92610 1267 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 GMCL1Q96IK5 515 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 MAP7D2Q96T17 732 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 CCSER1Q9C0I3 900 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 SH2D4AQ9H788 454 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
CLUHP3-201ENST00000254109 SPDYE5A6NIY4 337 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 IRF6O14896 467 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 TOMM70O94826 608 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 TUBB4AP04350 444 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 RPN1P04843 607 aaKnown RBP12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 MYL1P05976 194 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 GJA5P36382 358 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 HMGCS2P54868 508 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 STX17P56962 302 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 FKBP1BP68106 108 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 ZNF658Q5TYW1 1059 aaPredicted RBP12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 MED15Q96RN5 788 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 INTS13Q9NVM9 706 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 PTPRFP10586 1907 aa12.82□□□□□ -0.36
CLUHP3-201ENST00000254109 BMP3P12645 472 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 CDC25AP30304 524 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 ADCY7P51828 1080 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 PPATQ06203 517 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 NR1I3Q14994 352 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 E4F1Q66K89 784 aaPredicted RBP12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 CUEDC2Q9H467 287 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 MAGEF1Q9HAY2 307 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 RWDD2AQ9UIY3 292 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 CTNND2Q9UQB3 1225 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 VCAM1P19320 739 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 SNAP25P60880 206 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 TBX2Q13207 712 aaPredicted RBP12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 GPATCH4Q5T3I0 446 aaKnown RBP12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 SMYD4Q8IYR2 804 aaPredicted RBP12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 ANKRD20A12PQ8NF67 263 aa12.81□□□□□ -0.36
CLUHP3-201ENST00000254109 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms