RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TRIM17Q9Y577 477 aa16.17■□□□□ 0.18
VPS25-201ENST00000253794 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
VPS25-201ENST00000253794 SYNGAP1Q96PV0 1343 aa16.17■□□□□ 0.18
VPS25-201ENST00000253794 ADAMTS3O15072 1205 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
VPS25-201ENST00000253794 PKN2Q16513 984 aaKnown RBP16.16■□□□□ 0.18
VPS25-201ENST00000253794 LARP1BQ659C4 914 aaKnown RBP16.16■□□□□ 0.18
VPS25-201ENST00000253794 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 TAAR1Q96RJ0 339 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 RMDN3Q96TC7 470 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 PXMP2Q9NR77 195 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
VPS25-201ENST00000253794 ASB14A6NK59 587 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
VPS25-201ENST00000253794 KRT2P35908 639 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 SREBF1P36956 1147 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 XRRA1Q6P2D8 792 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
VPS25-201ENST00000253794 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
VPS25-201ENST00000253794 PDCD2LQ9BRP1 358 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 TINF2Q9BSI4 451 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 ANO3Q9BYT9 981 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
VPS25-201ENST00000253794 PLXNA1Q9UIW2 1896 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
VPS25-201ENST00000253794 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 B4DLN1 442 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
VPS25-201ENST00000253794 CYP2B6P20813 491 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 U2AF2P26368 475 aaKnown RBP eCLIP16.14■□□□□ 0.171e-8■□□□□ 10.2
VPS25-201ENST00000253794 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.17
VPS25-201ENST00000253794 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 MPHOSPH6Q99547 160 aaKnown RBP16.14■□□□□ 0.17
VPS25-201ENST00000253794 EHMT1Q9H9B1 1298 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 FLRT1Q9NZU1 646 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
VPS25-201ENST00000253794 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
VPS25-201ENST00000253794 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 STAM2O75886 525 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 CYP3A4P08684 503 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 SYT1P21579 422 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 PGM5Q15124 567 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 CCL14Q16627 93 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 ARHGEF16Q5VV41 709 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 PCNX4Q63HM2 1172 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 FCHSD1Q86WN1 690 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 RASGRP4Q8TDF6 673 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 TRIB2Q92519 343 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
VPS25-201ENST00000253794 ADCY3O60266 1144 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 HMGCRP04035 888 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 NR3C2P08235 984 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 DDIT3P35638 169 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 NR5A1Q13285 461 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 MAP3K21Q5TCX8 1036 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 FBXO46Q6PJ61 603 aaPredicted RBP16.12■□□□□ 0.17
VPS25-201ENST00000253794 ARMCX2Q7L311 632 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 KATNBL1Q9H079 304 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
VPS25-201ENST00000253794 H3BQV1 296 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 STX6O43752 255 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 SNAI1O95863 264 aaPredicted RBP16.11■□□□□ 0.17
VPS25-201ENST00000253794 EIF2AK2P19525 551 aaKnown RBP16.11■□□□□ 0.17
VPS25-201ENST00000253794 CCND2P30279 289 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 GRK4P32298 578 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 CIITAP33076 1130 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 USP11P51784 963 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
VPS25-201ENST00000253794 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 NOSTRINQ8IVI9 506 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 IL31RAQ8NI17 732 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 VTA1Q9NP79 307 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.11■□□□□ 0.17
VPS25-201ENST00000253794 MTMR6Q9Y217 621 aa16.11■□□□□ 0.17
VPS25-201ENST00000253794 CCDC194A0A1B0GVG4 234 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 EDIL3O43854 480 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 EIF3JO75822 258 aaKnown RBP16.1■□□□□ 0.17
VPS25-201ENST00000253794 FOSBP53539 338 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 MRPS9P82933 396 aaKnown RBP16.1■□□□□ 0.17
VPS25-201ENST00000253794 ARHGAP4P98171 946 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 STXBP2Q15833 593 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
VPS25-201ENST00000253794 MFSD14CQ5VZR4 134 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 MOXD1Q6UVY6 613 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 PGBD1Q96JS3 809 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 INPP4AQ96PE3 977 aaPredicted RBP16.1■□□□□ 0.17
VPS25-201ENST00000253794 ABHD16BQ9H3Z7 469 aa16.1■□□□□ 0.17
VPS25-201ENST00000253794 CYP3A7-CYP3A51PA0A087WV96 503 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms