RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 SLC4A8Q2Y0W8 1093 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 PPP4R3AQ6IN85 833 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 DYDC1Q8WWB3 177 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 WASF1Q92558 559 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 PIDD1Q9HB75 910 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 TMBIM4Q9HC24 238 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 FAM217BQ9NTX9 383 aaPredicted RBP20.15■□□□□ 0.82
PTPN12-201ENST00000248594 ATXN2Q99700 1313 aaKnown RBP20.15■□□□□ 0.82
PTPN12-201ENST00000248594 A0A1B0GVG6 124 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 H0Y3Z8 333 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 KIF5BP33176 963 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 SLCO1A2P46721 670 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 XRCC4Q13426 336 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 ZNF513Q8N8E2 541 aaPredicted RBP20.14■□□□□ 0.82
PTPN12-201ENST00000248594 MTMR8Q96EF0 704 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 DNAJC7Q99615 494 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 METTL22Q9BUU2 404 aaPredicted RBP20.14■□□□□ 0.82
PTPN12-201ENST00000248594 TAF1DQ9H5J8 278 aaPredicted RBP20.14■□□□□ 0.82
PTPN12-201ENST00000248594 SAMD15Q9P1V8 674 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 ZSWIM5Q9P217 1185 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 ABCF2Q9UG63 623 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 TRIM33Q9UPN9 1127 aa20.14■□□□□ 0.82
PTPN12-201ENST00000248594 CEP104O60308 925 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 ERICH2A1L162 156 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 KCNK3O14649 394 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 FAM47EQ6ZV65 393 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 LONP2Q86WA8 852 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 IRF2BP1Q8IU81 584 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 TAF4BQ92750 862 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 HPS3Q969F9 1004 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 KLHL29Q96CT2 875 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 LRRC4CQ9HCJ2 640 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 PAPOLBQ9NRJ5 636 aaKnown RBP20.14■□□□□ 0.81
PTPN12-201ENST00000248594 ABCF3Q9NUQ8 709 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 ATP8A1Q9Y2Q0 1164 aa20.14■□□□□ 0.81
PTPN12-201ENST00000248594 FLT3P36888 993 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 SLC1A4P43007 532 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 SH2D4AQ9H788 454 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 BATF3Q9NR55 127 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 PP2D1A8MPX8 630 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 SEMA3EO15041 775 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 PALMO75781 387 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 HOXB7P09629 217 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 TCIRG1Q13488 830 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 PDIA6Q15084 440 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 CCT6BQ92526 530 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 APPBP2Q92624 585 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 NOX5Q96PH1 765 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 TLR10Q9BXR5 811 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 USP31Q70CQ4 1352 aa20.13■□□□□ 0.81
PTPN12-201ENST00000248594 IGF2BP3O00425 579 aaKnown RBP eCLIP20.12■□□□□ 0.819e-6■■■□□ 17.5
PTPN12-201ENST00000248594 RAB27AP51159 221 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 TSGA10Q9BZW7 698 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 DDX47Q9H0S4 455 aaKnown RBP20.12■□□□□ 0.81
PTPN12-201ENST00000248594 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
PTPN12-201ENST00000248594 V9GY48 417 aaPredicted RBP20.12■□□□□ 0.81
PTPN12-201ENST00000248594 ALDH5A1P51649 535 aaPredicted RBP20.12■□□□□ 0.81
PTPN12-201ENST00000248594 SESN3P58005 492 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 TRAF1Q13077 416 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 BYSLQ13895 437 aaKnown RBP20.12■□□□□ 0.81
PTPN12-201ENST00000248594 LRRC14Q15048 493 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 CDCA2Q69YH5 1023 aaPredicted RBP20.12■□□□□ 0.81
PTPN12-201ENST00000248594 NAPBQ9H115 298 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 TECPR2O15040 1411 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 MMEP08473 750 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 DNM2P50570 870 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 LAMB3Q13751 1172 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 PIK3AP1Q6ZUJ8 805 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 CHMP6Q96FZ7 201 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 BABAM1Q9NWV8 329 aa20.12■□□□□ 0.81
PTPN12-201ENST00000248594 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.12■□□□□ 0.812e-9■■■■■ 44.1
PTPN12-201ENST00000248594 PSMA7O14818 248 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 SHBGP04278 402 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 FECHP22830 423 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 PAPOLAP51003 745 aaKnown RBP20.11■□□□□ 0.81
PTPN12-201ENST00000248594 ZBED6P86452 979 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 ZNF844Q08AG5 666 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 CCDC38Q502W7 563 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 SPATA20Q8TB22 786 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 LY9Q9HBG7 655 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 H7C1D1 291 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 SMNDC1O75940 238 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTPN12-201ENST00000248594 FMNL1O95466 1100 aaPredicted RBP20.11■□□□□ 0.81
PTPN12-201ENST00000248594 DHX9Q08211 1270 aaKnown RBP20.11■□□□□ 0.81
PTPN12-201ENST00000248594 WTAPQ15007 396 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 RUFY4Q6ZNE9 571 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 MAB21L3Q8N8X9 362 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 CNOT6LQ96LI5 555 aaKnown RBP20.11■□□□□ 0.81
PTPN12-201ENST00000248594 ARHGAP20Q9P2F6 1191 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 AGAP1Q9UPQ3 857 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 MINDY4BA8MYZ0 360 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 UBOX5O94941 541 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 ADCY1Q08828 1119 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 PRPF4BQ13523 1007 aaKnown RBP20.11■□□□□ 0.81
PTPN12-201ENST00000248594 LRRC34Q8IZ02 419 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 FAM89AQ96GI7 184 aa20.11■□□□□ 0.81
PTPN12-201ENST00000248594 MYH13Q9UKX3 1938 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 EPHB6O15197 1021 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 AATFQ9NY61 560 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTPN12-201ENST00000248594 PXDNQ92626 1479 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms