RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CHD4Q14839 1912 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 PAFAH1B1P43034 410 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 DUSP9Q99956 384 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 MYH13Q9UKX3 1938 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 MYMKA6NI61 221 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 SLURP2P0DP57 97 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 SRGNP10124 158 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 RAPGEF1Q13905 1077 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 HERC4Q5GLZ8 1057 aaPredicted RBP14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 RIN2Q8WYP3 895 aaPredicted RBP14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 ZMYND12Q9H0C1 365 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 FLT1P17948 1338 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 PDS5AQ29RF7 1337 aaKnown RBP14□□□□□ -0.17
RAB3IP-201ENST00000247833 SLC7A5Q01650 507 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 RASSF7Q02833 373 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 TTBK2Q6IQ55 1244 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 WDR59Q6PJI9 974 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 C10orf67Q8IYJ2 551 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 A0A1W2PQC6 194 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 SLC37A4O43826 429 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 AKR1B1P15121 316 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 NEDD1Q8NHV4 660 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 LRRC15Q8TF66 581 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 DDX12PQ92771 950 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 MXD3Q9BW11 206 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 ZC3H12CQ9C0D7 883 aaKnown RBP14□□□□□ -0.17
RAB3IP-201ENST00000247833 DUOX1Q9NRD9 1551 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 RCCD1A6NED2 376 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 NKRFO15226 690 aaKnown RBP eCLIP14□□□□□ -0.17
RAB3IP-201ENST00000247833 SND1Q7KZF4 910 aaKnown RBP eCLIP14□□□□□ -0.17
RAB3IP-201ENST00000247833 CUEDC2Q9H467 287 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 FAM204AQ9H8W3 233 aa14□□□□□ -0.17
RAB3IP-201ENST00000247833 NCK2O43639 380 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 KIF11P52732 1056 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 CACNB3P54284 484 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 TMC4Q7Z404 712 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 CENPHQ9H3R5 247 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 FAM53CQ9NYF3 392 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 DDX25Q9UHL0 483 aaKnown RBP13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 PCDHA12Q9UN75 941 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 MYH8P13535 1937 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 LRRC53A6NM62 1247 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 ANKRD65E5RJM6 399 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 MYL1P05976 194 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 SNAP25P60880 206 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 GLIS3Q8NEA6 775 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 SPZ1Q9BXG8 430 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 RTFDC1Q9BY42 306 aaPredicted RBP13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 USP40Q9NVE5 1235 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 KIAA1024Q9UPX6 916 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 MCM3P25205 808 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 TUBB4BP68371 445 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 VWA3BQ502W6 1294 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 KIAA0895Q8NCT3 520 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 DNAJC7Q99615 494 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 EHD2Q9NZN4 543 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 SERPINB2P05120 415 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 POLR2FP61218 127 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USH1GQ495M9 461 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L6PQ6QN14 398 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 TRMT1LQ7Z2T5 733 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 MYOCDQ8IZQ8 938 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 LRRIQ3A6PVS8 624 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 RNF40O75150 1001 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 ZNF76P36508 570 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 PRPHP41219 470 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 NOP2P46087 812 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 VAV2P52735 878 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 MRPL12P52815 198 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 NFRKBQ6P4R8 1299 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 RBM17Q96I25 401 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 SHANK3Q9BYB0 1731 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 PSTPIP2Q9H939 334 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 USP21Q9UK80 565 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
RAB3IP-201ENST00000247833 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 HLA-DOAP06340 250 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 GFPT1Q06210 699 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 PRR5LQ6MZQ0 368 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 CCDC84Q86UT8 332 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 ZNF507Q8TCN5 953 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 LSM14BQ9BX40 385 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms