RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 NSUN6Q8TEA1 469 aaKnown RBP11.64□□□□□ -0.55
HMGCL-201ENST00000235958 SOCS4Q8WXH5 440 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 FGD4Q96M96 766 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
HMGCL-201ENST00000235958 PLXNA1Q9UIW2 1896 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 ASTN1O14525 1302 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 MCM3APO60318 1980 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 STX6O43752 255 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 PRMT2P55345 433 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 IRF5Q13568 498 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 CCL14Q16627 93 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 MCTP1Q6DN14 999 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-201ENST00000235958 MAML3Q96JK9 1138 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 PGBD1Q96JS3 809 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 IPO9Q96P70 1041 aaKnown RBP11.63□□□□□ -0.55
HMGCL-201ENST00000235958 FOXP1Q9H334 677 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-201ENST00000235958 BRMS1Q9HCU9 246 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 PXMP2Q9NR77 195 aa11.63□□□□□ -0.55
HMGCL-201ENST00000235958 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
HMGCL-201ENST00000235958 VPS37CA5D8V6 355 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-201ENST00000235958 B4DLN1 442 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 ADCY3O60266 1144 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 NR3C2P08235 984 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
HMGCL-201ENST00000235958 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
HMGCL-201ENST00000235958 U2AF2P26368 475 aaKnown RBP eCLIP11.62□□□□□ -0.55
HMGCL-201ENST00000235958 ALDH5A1P51649 535 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-201ENST00000235958 UBXN2AP68543 259 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 AP3B2Q13367 1082 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 EARS2Q5JPH6 523 aaKnown RBP11.62□□□□□ -0.55
HMGCL-201ENST00000235958 MAMDC4Q6UXC1 1216 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 KRT25Q7Z3Z0 450 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 VSIG10LQ86VR7 867 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 RAET1EQ8TD07 263 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 IWS1Q96ST2 819 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 TINF2Q9BSI4 451 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 ANO3Q9BYT9 981 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 FLRT1Q9NZU1 646 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 MTMR6Q9Y217 621 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
HMGCL-201ENST00000235958 MYH7BA7E2Y1 1941 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 LCTP09848 1927 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 LOC102724159A0A0B4J2E5 919 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 CCDC194A0A1B0GVG4 234 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 ASB14A6NK59 587 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 EDIL3O43854 480 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 IGHA2P01877 340 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 MYCLP12524 364 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 ELNP15502 786 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 USP11P51784 963 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 GNL2Q13823 731 aaKnown RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 PGM5Q15124 567 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 PWP2Q15269 919 aaKnown RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 PIK3AP1Q6ZUJ8 805 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 CTU1Q7Z7A3 348 aaKnown RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 MSL3Q8N5Y2 521 aaKnown RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 TBCKQ8TEA7 893 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-201ENST00000235958 APBA2Q99767 749 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 EHMT1Q9H9B1 1298 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 PRDM10Q9NQV6 1147 aa11.61□□□□□ -0.55
HMGCL-201ENST00000235958 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 EIF3JO75822 258 aaKnown RBP11.6□□□□□ -0.55
HMGCL-201ENST00000235958 EDNRBP24530 442 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 CYP2C19P33261 490 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 SREBF1P36956 1147 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 MRPS9P82933 396 aaKnown RBP11.6□□□□□ -0.55
HMGCL-201ENST00000235958 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 PDE4DQ08499 809 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 PKP1Q13835 747 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 STXBP2Q15833 593 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 INF2Q27J81 1249 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-201ENST00000235958 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 NOSTRINQ8IVI9 506 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 TRMT44Q8IYL2 757 aaKnown RBP11.6□□□□□ -0.55
HMGCL-201ENST00000235958 MORC4Q8TE76 937 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 CRYGNQ8WXF5 182 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-201ENST00000235958 MPHOSPH6Q99547 160 aaKnown RBP11.6□□□□□ -0.55
HMGCL-201ENST00000235958 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 PTCH2Q9Y6C5 1203 aa11.6□□□□□ -0.55
HMGCL-201ENST00000235958 CYP3A4P08684 503 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 CCND2P30279 289 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 DDIT3P35638 169 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms