RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 KCTD2Q14681 263 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 TDRD7Q8NHU6 1098 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 LARP4BQ92615 738 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 CNOT6LQ96LI5 555 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 IGSF1Q8N6C5 1336 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 PDIA3P30101 505 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 IL9RQ01113 521 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 PPP1R18Q6NYC8 613 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 CNPY4Q8N129 248 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 ORAI2Q96SN7 254 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 DDX41Q9UJV9 622 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 ANAPC5Q9UJX4 755 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 IQGAP3Q86VI3 1631 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 POLR2FP61218 127 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 KRT39Q6A163 491 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 ANKRD35Q8N283 1001 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 CNOT10Q9H9A5 744 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 MRPL47Q9HD33 250 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 PTCH1Q13635 1447 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 WDR46O15213 610 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 BBOX1O75936 387 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 MAN2A1Q16706 1144 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 SUPT20HL1Q3ZLR7 823 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 ZNF772Q68DY9 489 aaPredicted RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 RFX6Q8HWS3 928 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 LRRC8AQ8IWT6 810 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 SULF1Q8IWU6 871 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.86□□□□□ -1.152e-6■■■■■ 54.9
CPS1-201ENST00000233072 MRRFQ96E11 262 aaKnown RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 SCYL1Q96KG9 808 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 ZNF408Q9H9D4 720 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 ZNF215Q9UL58 517 aaPredicted RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 WDR19Q8NEZ3 1342 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 PDE8BO95263 885 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 LRCH2Q5VUJ6 765 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 GBP7Q8N8V2 638 aaPredicted RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 MAP4K1Q92918 833 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 P2RX5Q93086 422 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 MMS19Q96T76 1030 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 CAPS2Q9BXY5 557 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 NBPF3Q9H094 633 aa7.86□□□□□ -1.15
CPS1-201ENST00000233072 TRPC5Q9UL62 973 aaPredicted RBP7.86□□□□□ -1.15
CPS1-201ENST00000233072 PRPF3O43395 683 aaKnown RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 HEXIM1O94992 359 aaKnown RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 TTC4O95801 387 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 GSPT1P15170 499 aaKnown RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 NFKBIAP25963 317 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 RNASE9P60153 205 aaKnown RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 GNGT1P63211 74 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 LRMPQ12912 555 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 SLC39A14Q15043 492 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 NCAPG2Q86XI2 1143 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 CCDC170Q8IYT3 715 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 LRRC8CQ8TDW0 803 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 DCAF4Q8WV16 495 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 LRGUKQ96M69 825 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 ZNF577Q9BSK1 485 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 NLRC4Q9NPP4 1024 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 TARBP1Q13395 1621 aaKnown RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 TMEM232C9JQI7 657 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 PSAPP07602 524 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 EPHB4P54760 987 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 POLA2Q14181 598 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 DBN1Q16643 649 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 MUM1Q2TAK8 710 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 CTAGE3PQ8IX95 158 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 USP44Q9H0E7 712 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 AP5M1Q9H0R1 490 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 KANSL2Q9H9L4 492 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 PCDHA7Q9UN72 937 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 PPP2R5DQ14738 602 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 GIMAP8Q8ND71 665 aaPredicted RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 RABGGTAQ92696 567 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 GBP5Q96PP8 586 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 PLEKHF1Q96S99 279 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 MYCBPQ99417 103 aaPredicted RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 SNX25Q9H3E2 840 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
CPS1-201ENST00000233072 DAAM1Q9Y4D1 1078 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 PCDHB4Q9Y5E5 795 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 ARAP3Q8WWN8 1544 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 RCAN1P53805 252 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 STX1BP61266 288 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 SEMA3FQ13275 785 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 SCYL2Q6P3W7 929 aa7.85□□□□□ -1.15
CPS1-201ENST00000233072 ADD2P35612 726 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 AP3B2Q13367 1082 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 SLMAPQ14BN4 828 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 LONRF3Q496Y0 759 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 SYDE2Q5VT97 1194 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 EFCAB13Q8IY85 973 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 LRRC47Q8N1G4 583 aaKnown RBP7.84□□□□□ -1.15
CPS1-201ENST00000233072 POMGNT1Q8WZA1 660 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 USP28Q96RU2 1077 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 PAGR1Q9BTK6 254 aa7.84□□□□□ -1.15
CPS1-201ENST00000233072 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.84□□□□□ -1.15
CPS1-201ENST00000233072 BAG5Q9UL15 447 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms