RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZSCAN10Q96SZ4 725 aaPredicted RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 FMO2Q99518 471 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 RASGRF2O14827 1237 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 MMEP08473 750 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 SLCO1A2P46721 670 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 C6orf118Q5T5N4 469 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 REXO1Q8N1G1 1221 aaKnown RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 CUEDC2Q9H467 287 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 GPCPD1Q9NPB8 672 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 MMP1P03956 469 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 SCG2P13521 617 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 OGFOD1Q8N543 542 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 STRN3Q13033 797 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 MYCT1Q8N699 235 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 CCDC89Q8N998 374 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 CCDC97Q96F63 343 aaPredicted RBP15.06■□□□□ 0
HCFC2-201ENST00000229330 FNBP1Q96RU3 617 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 TUBB6Q9BUF5 446 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 PSMD1Q99460 953 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 PLA2G4AP47712 749 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 GLT8D2Q9H1C3 349 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 TNKSO95271 1327 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 TRAPPC10P48553 1259 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 POLA2Q14181 598 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 CENPKQ9BS16 269 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 PTPN22Q9Y2R2 807 aa15.06■□□□□ 0
HCFC2-201ENST00000229330 KDM3AQ9Y4C1 1321 aa15.05■□□□□ 0
HCFC2-201ENST00000229330 DYNC1I2Q13409 638 aaKnown RBP15.05■□□□□ 0
HCFC2-201ENST00000229330 ADAM9Q13443 819 aa15.05■□□□□ 0
HCFC2-201ENST00000229330 BEND6Q5SZJ8 279 aaPredicted RBP15.05■□□□□ 0
HCFC2-201ENST00000229330 CAPN12Q6ZSI9 719 aa15.05■□□□□ 0
HCFC2-201ENST00000229330 CTAGE3PQ8IX95 158 aa15.05■□□□□ 0
HCFC2-201ENST00000229330 PANK4Q9NVE7 773 aa15.05■□□□□ 0
HCFC2-201ENST00000229330 ADCY2Q08462 1091 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 TCIRG1Q13488 830 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 MAST3O60307 1309 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 ARAP3Q8WWN8 1544 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 LMNAP02545 664 aaKnown RBP15.05■□□□□ -0
HCFC2-201ENST00000229330 NUGGCQ68CJ6 796 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 DPH6Q7L8W6 267 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 GPBP1Q86WP2 473 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 TEX2Q8IWB9 1127 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 ANGPTL2Q9UKU9 493 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 EIF3HO15372 352 aaKnown RBP eCLIP15.05■□□□□ -0
HCFC2-201ENST00000229330 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.05■□□□□ -0
HCFC2-201ENST00000229330 ATP6V1G3Q96LB4 118 aa15.05■□□□□ -0
HCFC2-201ENST00000229330 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.04■□□□□ -0
HCFC2-201ENST00000229330 SMCO2A6NFE2 343 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 CFAP73A6NFT4 308 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 PPP2R2AP63151 447 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 ADCY1Q08828 1119 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 GNPTABQ3T906 1256 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 PPP4R1Q8TF05 950 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 RBM17Q96I25 401 aaKnown RBP15.04■□□□□ -0
HCFC2-201ENST00000229330 EPSTI1Q96J88 318 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 FAM167BQ9BTA0 163 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 ZBTB21Q9ULJ3 1066 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 HIBADHP31937 336 aaKnown RBP15.04■□□□□ -0
HCFC2-201ENST00000229330 DCUN1D2Q6PH85 259 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 ATP2A3Q93084 1043 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 FAM212AQ96EL1 285 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 POC1B-GALNT4F8VUJ3 575 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 IFNB1P01574 187 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 PDE6AP16499 860 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 PDE6CP51160 858 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 ZBTB17Q13105 803 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 TMED1Q13445 227 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 EXOC3L4Q17RC7 722 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 FAM26FQ5R3K3 315 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 GDAP1Q8TB36 358 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 RNF26Q9BY78 433 aaPredicted RBP15.04■□□□□ -0
HCFC2-201ENST00000229330 METTL14Q9HCE5 456 aaKnown RBP15.04■□□□□ -0
HCFC2-201ENST00000229330 MYL1P05976 194 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 LMNB1P20700 586 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 BATF3Q9NR55 127 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 TMEM51Q9NW97 253 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 CHMP2AO43633 222 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 ST13P4Q8IZP2 240 aaPredicted RBP15.04■□□□□ -0
HCFC2-201ENST00000229330 AP1M1Q9BXS5 423 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 HDAC6Q9UBN7 1215 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
HCFC2-201ENST00000229330 SERPING1P05155 500 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
HCFC2-201ENST00000229330 ABCC12Q96J65 1359 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 M0R2C6 588 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 MAPK13O15264 365 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 MAN1A1P33908 653 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 NR5A1Q13285 461 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 FAM47AQ5JRC9 791 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 ZNF449Q6P9G9 518 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 EYA3Q99504 573 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 EXOC7Q9UPT5 735 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 PCDHB6Q9Y5E3 794 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 ARHGAP31Q2M1Z3 1444 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 ARHGEF35A5YM69 484 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 H2AFXP16104 143 aaPredicted RBP15.03■□□□□ -0
HCFC2-201ENST00000229330 CCNE1P24864 410 aa15.03■□□□□ -0
HCFC2-201ENST00000229330 HNRNPH1P31943 449 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms