RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 BACE1P56817 501 aa6.74□□□□□ -1.33
AFP-201ENST00000226359 UBXN2AP68543 259 aa6.74□□□□□ -1.33
AFP-201ENST00000226359 LACTBP83111 547 aaPredicted RBP6.74□□□□□ -1.33
AFP-201ENST00000226359 MLLT1Q03111 559 aaPredicted RBP6.74□□□□□ -1.33
AFP-201ENST00000226359 TBCELQ5QJ74 424 aa6.74□□□□□ -1.33
AFP-201ENST00000226359 NOP9Q86U38 636 aaKnown RBP6.74□□□□□ -1.33
AFP-201ENST00000226359 EDC3Q96F86 508 aaKnown RBP6.74□□□□□ -1.33
AFP-201ENST00000226359 CCDC17Q96LX7 622 aa6.74□□□□□ -1.33
AFP-201ENST00000226359 TSPAN10Q9H1Z9 355 aaPredicted RBP6.74□□□□□ -1.33
AFP-201ENST00000226359 MYPNQ86TC9 1320 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 TNPO2O14787 897 aaKnown RBP6.73□□□□□ -1.33
AFP-201ENST00000226359 APPP05067 770 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 EPHA4P54764 986 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 SOX10P56693 466 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 FAM110CQ1W6H9 321 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 C17orf99Q6UX52 265 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 TMEM179Q6ZVK1 233 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 CCDC84Q86UT8 332 aaPredicted RBP6.73□□□□□ -1.33
AFP-201ENST00000226359 SLC43A3Q8NBI5 491 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 SDR42E1Q8WUS8 393 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 ZNF395Q9H8N7 513 aaPredicted RBP6.73□□□□□ -1.33
AFP-201ENST00000226359 DCP1AQ9NPI6 582 aaPredicted RBP6.73□□□□□ -1.33
AFP-201ENST00000226359 CUEDC1Q9NWM3 386 aaPredicted RBP6.73□□□□□ -1.33
AFP-201ENST00000226359 USP3Q9Y6I4 520 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 DOCK1Q14185 1865 aa6.73□□□□□ -1.33
AFP-201ENST00000226359 A0A1W2PRU2 124 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 CYP2C8P10632 490 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 SNRPBP14678 240 aaKnown RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 CCNA1P78396 465 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 GPAT2Q6NUI2 795 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 EVI5LQ96CN4 794 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 MKNK2Q9HBH9 465 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 SRRDQ9UH36 339 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.72□□□□□ -1.33
AFP-201ENST00000226359 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 CASP8AP2Q9UKL3 1982 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 TNFRSF10BO14763 440 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 GPAA1O43292 621 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 BCRP11274 1271 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ATP2B2Q01814 1243 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ICA1Q05084 483 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 MOGSQ13724 837 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ZYXQ15942 572 aaKnown RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 FAM26DQ5JW98 314 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 TREML2Q5T2D2 321 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 TSHZ3Q63HK5 1081 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 TATDN1Q6P1N9 297 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 C16orf46Q6P387 395 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ATCAYQ86WG3 371 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 MEIOBQ8N635 442 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 NIF3L1Q9GZT8 377 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 NAPBQ9H115 298 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ASCC2Q9H1I8 757 aaPredicted RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 DNAJC18Q9H819 358 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ATP13A2Q9NQ11 1180 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 METTL5Q9NRN9 209 aaKnown RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 TMA7Q9Y2S6 64 aaKnown RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 CTDP1Q9Y5B0 961 aaPredicted RBP6.72□□□□□ -1.33
AFP-201ENST00000226359 PCDHGB7Q9Y5F8 929 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 PTCH2Q9Y6C5 1203 aa6.72□□□□□ -1.33
AFP-201ENST00000226359 ADGRA2Q96PE1 1338 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 TLDC2A0PJX2 215 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 HIP1O00291 1037 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 ZBTB39O15060 712 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 SHMT1P34896 483 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 PDE4BQ07343 736 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 TICAM2Q86XR7 235 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 ANKRD13CQ8N6S4 541 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 SOCS4Q8WXH5 440 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 ARMC5Q96C12 935 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 C12orf42Q96LP6 360 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 PAGR1Q9BTK6 254 aa6.71□□□□□ -1.34
AFP-201ENST00000226359 LAMB1P07942 1786 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 MINDY4BA8MYZ0 360 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 MEN1O00255 615 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 PRKAB2O43741 272 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 IGHA1P01876 353 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 SLURP2P0DP57 97 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 CYP2D6P10635 497 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 CAPN2P17655 700 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 MAPK4P31152 587 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 HOXA7P31268 230 aaPredicted RBP6.7□□□□□ -1.34
AFP-201ENST00000226359 GRK4P32298 578 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 CDK8P49336 464 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 PLCD1P51178 756 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 HERVK_113P62684 666 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 GABPAQ06546 454 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 SEPT2Q15019 361 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 TLR1Q15399 786 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 SBK1Q52WX2 424 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 COX20Q5RI15 118 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 C12orf60Q5U649 245 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 C16orf86Q6ZW13 317 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 GPRC5AQ8NFJ5 357 aa6.7□□□□□ -1.34
AFP-201ENST00000226359 LPAR1Q92633 364 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms