RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 POLR3EQ9NVU0 708 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 CSF2RAP15509 400 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 PSMC6P62333 389 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
PFN1-201ENST00000225655 C16orf59Q7L2K0 433 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 STAG2Q8N3U4 1231 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 OR6J1Q8NGC5 347 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 SYTL5Q8TDW5 730 aaPredicted RBP20.91■□□□□ 0.94
PFN1-201ENST00000225655 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.91■□□□□ 0.943e-7■■□□□ 13.8
PFN1-201ENST00000225655 PPP1R12CQ9BZL4 782 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 SEMA6BQ9H3T3 888 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 VAT1LQ9HCJ6 419 aa20.91■□□□□ 0.94
PFN1-201ENST00000225655 MRPL11Q9Y3B7 192 aaKnown RBP20.91■□□□□ 0.94
PFN1-201ENST00000225655 TMEM265A0A087WTH1 108 aa20.9■□□□□ 0.94
PFN1-201ENST00000225655 B4GALT4O60513 344 aa20.9■□□□□ 0.94
PFN1-201ENST00000225655 HMGB1P09429 215 aaKnown RBP20.9■□□□□ 0.94
PFN1-201ENST00000225655 CYP2C18P33260 490 aa20.9■□□□□ 0.94
PFN1-201ENST00000225655 PURAQ00577 322 aaKnown RBP20.9■□□□□ 0.94
PFN1-201ENST00000225655 BRDTQ58F21 947 aaPredicted RBP20.9■□□□□ 0.94
PFN1-201ENST00000225655 NSUN6Q8TEA1 469 aaKnown RBP20.9■□□□□ 0.94
PFN1-201ENST00000225655 TBC1D5Q92609 795 aa20.9■□□□□ 0.94
PFN1-201ENST00000225655 TRPV6Q9H1D0 765 aa20.9■□□□□ 0.94
PFN1-201ENST00000225655 HIPK3Q9H422 1215 aa20.9■□□□□ 0.94
PFN1-201ENST00000225655 SCN10AQ9Y5Y9 1956 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 ERICH2A1L162 156 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 PALM3A6NDB9 673 aaPredicted RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 A6NJR5 290 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 KLRF2D3W0D1 207 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 TXNP10599 105 aaKnown RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 PSMA5P28066 241 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 TTLL4Q14679 1199 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 TSGA10IPQ3SY00 556 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 TMEM240Q5SV17 173 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 PSRC1Q6PGN9 363 aaPredicted RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 MTMR8Q96EF0 704 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 IWS1Q96ST2 819 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 AMNQ9BXJ7 453 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 ALDH8A1Q9H2A2 487 aaPredicted RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 TTYH1Q9H313 450 aaPredicted RBP20.89■□□□□ 0.93
PFN1-201ENST00000225655 COL20A1Q9P218 1284 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 MAD2L2Q9UI95 211 aa20.89■□□□□ 0.93
PFN1-201ENST00000225655 KIAA1217Q5T5P2 1943 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 KPNA6O60684 536 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 MYL3P08590 195 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 RASIP1Q5U651 963 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 TAAR1Q96RJ0 339 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 RMDN3Q96TC7 470 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 CDX2Q99626 313 aaPredicted RBP20.88■□□□□ 0.93
PFN1-201ENST00000225655 MTG1Q9BT17 334 aaPredicted RBP20.88■□□□□ 0.93
PFN1-201ENST00000225655 NOC4LQ9BVI4 516 aaKnown RBP20.88■□□□□ 0.93
PFN1-201ENST00000225655 IL23AQ9NPF7 189 aa20.88■□□□□ 0.93
PFN1-201ENST00000225655 GPHNQ9NQX3 736 aaPredicted RBP20.88■□□□□ 0.93
PFN1-201ENST00000225655 IFIT3O14879 490 aaKnown RBP20.87■□□□□ 0.93
PFN1-201ENST00000225655 MCM5P33992 734 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 GHRHRQ02643 423 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 CCDC62Q6P9F0 684 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 ZNF365Q70YC5 407 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 COPS5Q92905 334 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 KCNB2Q92953 911 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 NEK1Q96PY6 1258 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 TAF6LQ9Y6J9 622 aa20.87■□□□□ 0.93
PFN1-201ENST00000225655 UMODL1Q5DID0 1318 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 OPLAHO14841 1288 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 ZBTB5O15062 677 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 ARIH2O95376 493 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 SUPT20HL2P0C7V6 817 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 ACRP10323 421 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 HSD17B4P51659 736 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 GRM4Q14833 912 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 STXBP2Q15833 593 aa20.86■□□□□ 0.93
PFN1-201ENST00000225655 PPP1R11O60927 126 aaPredicted RBP20.85■□□□□ 0.93
PFN1-201ENST00000225655 CFBP00751 764 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 DNAJB2P25686 324 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 ANAPC15P60006 121 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 WTAPQ15007 396 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 STOX1Q6ZVD7 989 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 MTA3Q9BTC8 594 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 TRMT13Q9NUP7 481 aaKnown RBP20.85■□□□□ 0.93
PFN1-201ENST00000225655 MAP3K20Q9NYL2 800 aaKnown RBP20.85■□□□□ 0.93
PFN1-201ENST00000225655 PCDHA1Q9Y5I3 950 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 SNX14Q9Y5W7 946 aa20.85■□□□□ 0.93
PFN1-201ENST00000225655 EIF2AK2P19525 551 aaKnown RBP20.84■□□□□ 0.93
PFN1-201ENST00000225655 TROAPQ12815 778 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 TRAF1Q13077 416 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 NBPF20Q3BBV1 942 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 NFRKBQ6P4R8 1299 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 SEPT14Q6ZU15 432 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 RASEFQ8IZ41 740 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 SAMD3Q8N6K7 520 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 HERVK_113Q902F9 699 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 JAKMIP1Q96N16 626 aaKnown RBP20.84■□□□□ 0.93
PFN1-201ENST00000225655 WNT8AQ9H1J5 351 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 RIOX1Q9H6W3 641 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 SENP2Q9HC62 589 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 PXMP2Q9NR77 195 aa20.84■□□□□ 0.93
PFN1-201ENST00000225655 EIF3JO75822 258 aaKnown RBP20.83■□□□□ 0.93
PFN1-201ENST00000225655 SEC24BO95487 1268 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms