RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 LSP1P33241 339 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 TXKP42681 527 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 TFAP4Q01664 338 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 TRIM9Q9C026 710 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 HDLBPQ00341 1268 aaKnown RBP13.99□□□□□ -0.17
PITRM1-201ENST00000224949 KCNB1Q14721 858 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 ALS2CLQ60I27 953 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 PNMA1Q8ND90 353 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 OR2W6PQ8NHA6 318 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 CABS1Q96KC9 395 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
PITRM1-201ENST00000224949 LMTK3Q96Q04 1460 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 CAVIN4Q5BKX8 364 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 CEP57Q86XR8 500 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 C4orf32Q8N8J7 132 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 SH3GL2Q99962 352 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 NIP7Q9Y221 180 aaKnown RBP eCLIP13.99□□□□□ -0.17
PITRM1-201ENST00000224949 LRP6O75581 1613 aa13.99□□□□□ -0.17
PITRM1-201ENST00000224949 GLI3P10071 1580 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 MEFVO15553 781 aaPredicted RBP13.98□□□□□ -0.17
PITRM1-201ENST00000224949 PALMO75781 387 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
PITRM1-201ENST00000224949 PAK2Q13177 524 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 VWA3BQ502W6 1294 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 NAA35Q5VZE5 725 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 BICDL1Q6ZP65 573 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 DYNLL2Q96FJ2 89 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 GOLPH3Q9H4A6 298 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 TBC1D7Q9P0N9 293 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 PLAGL2Q9UPG8 496 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 NAPAP54920 295 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 DNAAF5Q86Y56 855 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
PITRM1-201ENST00000224949 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 MKNK2Q9HBH9 465 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 ZNF233A6NK53 670 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 USP17L8P0C7I0 530 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 ACTN3Q08043 901 aaPredicted RBP13.98□□□□□ -0.17
PITRM1-201ENST00000224949 SF3B2Q13435 895 aaKnown RBP13.98□□□□□ -0.17
PITRM1-201ENST00000224949 CCDC40Q4G0X9 1142 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 MICALCLQ6ZW33 695 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 ZNF473Q8WTR7 871 aaKnown RBP13.98□□□□□ -0.17
PITRM1-201ENST00000224949 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 PCDHA6Q9UN73 950 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 PCDHA8Q9Y5H6 950 aa13.98□□□□□ -0.17
PITRM1-201ENST00000224949 BAZ2AQ9UIF9 1905 aaKnown RBP13.97□□□□□ -0.17
PITRM1-201ENST00000224949 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CDR1P51861 262 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 RAPGEF1Q13905 1077 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CALML4Q96GE6 196 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 PLAAQ9Y263 795 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 GOLGA6L7A0A1B0GV03 622 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 GIMAP7Q8NHV1 300 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CCDC114Q96M63 670 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CEP89Q96ST8 783 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CRNKL1Q9BZJ0 848 aaKnown RBP13.97□□□□□ -0.17
PITRM1-201ENST00000224949 CXorf56Q9H5V9 222 aa13.97□□□□□ -0.17
PITRM1-201ENST00000224949 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
PITRM1-201ENST00000224949 KIAA0895Q8NCT3 520 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 CCT8L2Q96SF2 557 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 ZHX3Q9H4I2 956 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 PPP1R37O75864 691 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 OR52Z1P0C646 297 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 AMPD3Q01432 767 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 KLHDC7AQ5VTJ3 777 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 DDX42Q86XP3 938 aaKnown RBP eCLIP13.96□□□□□ -0.17
PITRM1-201ENST00000224949 TAF4BQ92750 862 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 SCLT1Q96NL6 688 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 DCP1AQ9NPI6 582 aaPredicted RBP13.96□□□□□ -0.17
PITRM1-201ENST00000224949 BCL9LQ86UU0 1499 aa13.96□□□□□ -0.17
PITRM1-201ENST00000224949 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.18
PITRM1-201ENST00000224949 NLRP14Q86W24 1093 aa13.96□□□□□ -0.18
PITRM1-201ENST00000224949 UBLCP1Q8WVY7 318 aaPredicted RBP13.96□□□□□ -0.18
PITRM1-201ENST00000224949 TMCO5BA8MYB1 307 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 KCNK3O14649 394 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 MARCH6O60337 910 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 PRDX5P30044 214 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 EPS15P42566 896 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 NELFCDQ8IXH7 590 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 CASKIN2Q8WXE0 1202 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 EPN3Q9H201 632 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 BIN2Q9UBW5 565 aaPredicted RBP13.95□□□□□ -0.18
PITRM1-201ENST00000224949 TRPM3Q9HCF6 1732 aaPredicted RBP13.95□□□□□ -0.18
PITRM1-201ENST00000224949 TULP1O00294 542 aaPredicted RBP13.95□□□□□ -0.18
PITRM1-201ENST00000224949 TRAF5O00463 557 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 CCDC121Q6ZUS5 278 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 SV2BQ7L1I2 683 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 TMOD1P28289 359 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms