RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 AIFM3Q96NN9 605 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 FTOQ9C0B1 505 aaKnown RBP eCLIP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 HAUS2Q9NVX0 235 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 RGS12O14924 1447 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 ADRA2BP18089 450 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 VPS41P49754 854 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 TFAMQ00059 246 aaKnown RBP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 GRAMD1CQ8IYS0 662 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 NME8Q8N427 588 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 RAVER2Q9HCJ3 691 aaKnown RBP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 ZNF215Q9UL58 517 aaPredicted RBP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 PCDHB4Q9Y5E5 795 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 A0A0G2JLW4 131 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 NR2F2P24468 414 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 SLC44A5Q8NCS7 719 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 OR8K1Q8NGG5 319 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 CDHR1Q96JP9 859 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 JPH2Q9BR39 696 aaPredicted RBP20.23■□□□□ 0.83
CLIP2-201ENST00000223398 CALCOCO1Q9P1Z2 691 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 GIPC1O14908 333 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 PLEKHA8P1O95397 391 aa20.23■□□□□ 0.83
CLIP2-201ENST00000223398 METTL14Q9HCE5 456 aaKnown RBP20.22■□□□□ 0.83
CLIP2-201ENST00000223398 AFG3L2Q9Y4W6 797 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 ANKRD36BP1Q96IX9 119 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 VPS37BQ9H9H4 285 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 SAMD15Q9P1V8 674 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 HGSO14964 777 aaPredicted RBP20.22■□□□□ 0.83
CLIP2-201ENST00000223398 PODNQ7Z5L7 613 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 IFT20Q8IY31 132 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 USP17L5A8MUK1 530 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 CTTNQ14247 550 aaKnown RBP20.22■□□□□ 0.83
CLIP2-201ENST00000223398 SEPT2Q15019 361 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 RSRC2Q7L4I2 434 aaKnown RBP20.22■□□□□ 0.83
CLIP2-201ENST00000223398 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 NACC1Q96RE7 527 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
CLIP2-201ENST00000223398 CYP2E1P05181 493 aaPredicted RBP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 HADHQ16836 314 aaKnown RBP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 HDXQ7Z353 690 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 CCDC110Q8TBZ0 833 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 OTUD5Q96G74 571 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 STRBPQ96SI9 672 aaKnown RBP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 CFAP221Q4G0U5 840 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 NLRP4Q96MN2 994 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 DDX23Q9BUQ8 820 aaKnown RBP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 JCADQ9P266 1359 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 PNMA6FA0A0J9YX94 578 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 XPOTO43592 962 aaKnown RBP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 U2AF2P26368 475 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 CLCN1P35523 988 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 EXOC3L4Q17RC7 722 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 SIRT2Q8IXJ6 389 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 CNOT6LQ96LI5 555 aaKnown RBP20.21■□□□□ 0.83
CLIP2-201ENST00000223398 MMP1P03956 469 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 PSAPP07602 524 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 KAZNQ674X7 775 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 CEP128Q6ZU80 1094 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 CCDC121Q6ZUS5 278 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 FAM76AQ8TAV0 307 aa20.21■□□□□ 0.83
CLIP2-201ENST00000223398 LAD1O00515 517 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 KCNK3O14649 394 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 GCFC2P16383 781 aaKnown RBP20.2■□□□□ 0.82
CLIP2-201ENST00000223398 NFX1Q12986 1120 aaKnown RBP20.2■□□□□ 0.82
CLIP2-201ENST00000223398 NXF1Q9UBU9 619 aaKnown RBP20.2■□□□□ 0.82
CLIP2-201ENST00000223398 ATP5DP30049 168 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 SLC39A14Q15043 492 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 CTAGE3PQ8IX95 158 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 C7orf31Q8N865 590 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 FAM149B1Q96BN6 582 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 ACCSQ96QU6 501 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 CRB1P82279 1406 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 IVLP07476 585 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 NSFP46459 744 aaKnown RBP20.2■□□□□ 0.82
CLIP2-201ENST00000223398 TRAPPC10P48553 1259 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 PCDHA5Q9Y5H7 936 aa20.2■□□□□ 0.82
CLIP2-201ENST00000223398 NMT2O60551 498 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 SLC12A2P55011 1212 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 SETDB1Q15047 1291 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 SNX25Q9H3E2 840 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 MYO3BQ8WXR4 1341 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 SF3A3Q12874 501 aaKnown RBP eCLIP20.19■□□□□ 0.824e-6■■□□□ 11.7
CLIP2-201ENST00000223398 SPP2Q13103 211 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 HS1BP3Q53T59 392 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 NT5C1BQ96P26 610 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 ANKRD13CQ8N6S4 541 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 KIF23Q02241 960 aaPredicted RBP20.19■□□□□ 0.82
CLIP2-201ENST00000223398 METTL23Q86XA0 190 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 TET3O43151 1660 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 PRPF3O43395 683 aaKnown RBP20.19■□□□□ 0.82
CLIP2-201ENST00000223398 KRT15P19012 456 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 PTPN21Q16825 1174 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 CAPN12Q6ZSI9 719 aa20.19■□□□□ 0.82
CLIP2-201ENST00000223398 THAP12O43422 761 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms